Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01108 ATGGCGCCGAGTAGAAGCAGAGATGTGCAGCTGACTTCGATCGCCGGCGCCGCAGACGATGACGCCGGCGACTTGGAGGAGGTGCGGCTACTGGACTCCTACGATTCCCGCGACGGAATTGACGACGGCGGAATGAGGCGGATTCAGGTGAGGGTCACCGGGATGACCTGTGCTGCATGCTCCACCTCCGTCGAATCGGCTCTCTGCGCCGTCAACGGTGTAATTACCGCCTCCGTTGCTCTTCTTCAGAACAAAGCCGATGTAGTTTTCAACCCAGCTCTGGTCAAGGTTGTCTGGAATATTTTTTTTGCAACCTCCACTCCCCCTTTTGAAGATGCGGGGTTTGAAGCAGAAATATTACCAGAACCCAGCACAACTGGAAAGATGCCACATGGAACACTTGTGGGACAATTCATAATCGGAGGTATGACATGTGCGGCCTGTGTAAATTCCATGGAAGGCATTTTGAGAGATCTTCCAGGGGTCAAGAGGGCTGTAGTGGCTTTGGCTACTTCGTTAGGCGAAGTTGAATATGATCCGAGTGTAATAGGTAAAGATGATATAGTCAATGCAATTGAAGATGCTGGTTTTGAAGGTTCATTTGTTCAGAGCAGTGAACAGGATAAAGTAGTTTTTGAGGTGGTTGGTGTGTATAGTCTGATTGACACTCAAGTTTTAGAAGGTGTGCTTGGCAGCATCAAAGGAGTAAGGCAGTTTCGTTTTGATCAGATATCAGGTCAATTGGATATTGTCTTTGATCCTGAAGTTCTCAGTCCTAGATACTTAGTTGATGGGATTGAAGGGAGAAGCAGTGGAAAATTTAAATTACGTGTTAGAAACCCTTATACAAGGATGGCTTCTAAAGATGTTGAGGAGAGCTCAGCTATGTTTCGGCTCTTCGTCTCTAGTTTGCTTCTTAGTATTCCTCTCTTCTTCATGAAGCTAGTATGTCCTCATATACCAATGATATATTCTTTACTACTCCGGAGATGCGGGCCTTTCCTTATGGGTGATTGGTTGAAGTGGGGATTGGTGAGTATCATTCAATTTGTCATTGGGAAGCGTTTCTACATTGCTGCTGCCAGAGCTCTTAAAAATGGTTCGACAAACATGGATGTTCTAGTTGCTGTAGGAACTACTGCATCTTATACTTATTCTGTTTGTGCTCTTCTATATGGTGCTCTTACTGGATTTAGGGCTCCAGTATACTTTGAAACAAGTGCCATGCTCATAACATTTGTATTGTTGGGCAAGTATTTGGAATGCCTTGCCAAGGGGAAGACATCAGATGCCATCAAGAAGTTAGTAGAACTTGCTCCTGCAACAGCTTTATTGATTATCAAAGATAAAGGTGGTAGATCTATTGAAGAAAAGGAAATTGATTCCTTGCTCGTTCAACCTGGTGACATGCTAAAAGTTGTTCCTGGTACAAAGATTCCTGCCGATGGAATCGTTACTTGGGGATCAAGTTATGTCAATGAAAGCATGGTAACAGGGGAAGCTGTACCTGTTCAGAAGGAGGTGAATGCATCGGTGATTGGTGGTACAATAAATTTGCATGGTGTCCTTCACATTCAAGCTACCAAAGTAGGATCTGATACAGTTTTGAGTCAGATAATTAGTTTAGTTGAGACAGCACAGATGTCCAAAGCTCCAATTCAGAAATTTGCTGATTATGTTGCAAGTATATTTGTTCCTACAGTTGTTTCTTTGGCATTATTGACATTTTTCTCTTGGTATGGTGCTGGGTCTATTGGAGCTTATCCTGAGGAATGGCTGCCGGAAAATGGAAATCACTTTGTTTTTGCTCTAATGTTCTCAATAGCTGTCGTAGTGATTGCATGTCCCTGTGCGCTTGGCTTGGCAACACCAACAGCTGTCATGGTGGCGACAGGGGTTGGGGCTAACAATGGAGTGCTAATTAAAGGAGGAGATGCTTTGGAAAGAGCTCAGATGGTGAAGTATGTGATATTTGATAAAACAGGAACTCTGACACAAGGAAAAGCTAGTGTTACTACTGCCAAGACATTCACAGGAATGCAACGGGGAGAATTTCTCAGATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACATCCACTGGCACAAGCAATAGTAGAATATGCACGTCATTTTCATTTCTTTGATGACTCTTCTGCTTCTGATGGTACCCAAAATGGTGCCAAGGAGTTGAAATCTGGGTGGCTTTTTGATGTCTCAGATTTCATTGCTCTTCCTGGAAGAGGTGTTCAATGCCTTATAGATGGGAAACCTATTTTGGTAGTTGGTAACAGGAAGCTCATGGCAGAAAGTGGCATAGATATCTCAGATGAAGTGGAAAATTTTGTGGTAGAGCTGGAAGAAAGTGCAAGGACAGGGGTACTAGTAGCATATGATGATATAATAATTGGAGTCTTGGGGATTTCAGATCCACTAAAGAGAGAAGCATCTGTAGTTATAGAAGGGCTCCAGAAAATGGGTGTCAGACCTGTTATGGTTACAGGAGATAACCGGAGAACTGCTCGCGCTGTGGCCAAGGAGGTTGGCATCCAAGATGTTAGGGCAGAGGTTATGCCTGCTGGAAAAGCTGATGTTGTTCAATCATTCCAAAAAGACGGAAGCATAGTAGCAATGGTTGGTGATGGTATCAATGACTCTCCTGCATTAGCTGCTGCTGATGTTGGTATGGCAATAGGGGCTGGAACAGATATTGCAATAGAAGCTGCTGATTACGTGTTGATGCGAAACAACTTGGAAGACGTGATCACCGCCATTGATCTTTCCCGGAAGACCTTCTCCCGTATTCGGTTGAACTATGTATTTGCAATTGTGTATAATGTTGTGGCTATACCAGTTGCTGCTGGGGCTTTGTATCCTTCACTGAGGATCAAGCTGCCACCATGGGTTGCTGGTGCATGCATGGCTCTATCTTCTGTAAGTGTTGTATGTTCTTCTTTGCTTCTCAGAAGATATAGAAGACCCAGACTTACTCAAATACTTGAAATAGTTGTAGAGTAA 3015 0.4395 MAPSRSRDVQLTSIAGAADDDAGDLEEVRLLDSYDSRDGIDDGGMRRIQVRVTGMTCAACSTSVESALCAVNGVITASVALLQNKADVVFNPALVKVVWNIFFATSTPPFEDAGFEAEILPEPSTTGKMPHGTLVGQFIIGGMTCAACVNSMEGILRDLPGVKRAVVALATSLGEVEYDPSVIGKDDIVNAIEDAGFEGSFVQSSEQDKVVFEVVGVYSLIDTQVLEGVLGSIKGVRQFRFDQISGQLDIVFDPEVLSPRYLVDGIEGRSSGKFKLRVRNPYTRMASKDVEESSAMFRLFVSSLLLSIPLFFMKLVCPHIPMIYSLLLRRCGPFLMGDWLKWGLVSIIQFVIGKRFYIAAARALKNGSTNMDVLVAVGTTASYTYSVCALLYGALTGFRAPVYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLIIKDKGGRSIEEKEIDSLLVQPGDMLKVVPGTKIPADGIVTWGSSYVNESMVTGEAVPVQKEVNASVIGGTINLHGVLHIQATKVGSDTVLSQIISLVETAQMSKAPIQKFADYVASIFVPTVVSLALLTFFSWYGAGSIGAYPEEWLPENGNHFVFALMFSIAVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQMVKYVIFDKTGTLTQGKASVTTAKTFTGMQRGEFLRLVASAEASSEHPLAQAIVEYARHFHFFDDSSASDGTQNGAKELKSGWLFDVSDFIALPGRGVQCLIDGKPILVVGNRKLMAESGIDISDEVENFVVELEESARTGVLVAYDDIIIGVLGISDPLKREASVVIEGLQKMGVRPVMVTGDNRRTARAVAKEVGIQDVRAEVMPAGKADVVQSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAADYVLMRNNLEDVITAIDLSRKTFSRIRLNYVFAIVYNVVAIPVAAGALYPSLRIKLPPWVAGACMALSSVSVVCSSLLLRRYRRPRLTQILEIVVE 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01108 1004 ProSiteProfiles Heavy-metal-associated domain profile. 209 267 IPR006121 GO:0046872
Adu04g01108 1004 SUPERFAMILY Calcium ATPase, transduction domain A 457 543 IPR008250 -
Adu04g01108 1004 SUPERFAMILY HMA, heavy metal-associated domain 43 96 IPR036163 GO:0046872
Adu04g01108 1004 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 371 987 IPR027256 GO:0006812|GO:0016021|GO:0019829
Adu04g01108 1004 PANTHER HEAVY METAL P-TYPE ATPASE 7 997 - -
Adu04g01108 1004 ProSitePatterns Heavy-metal-associated domain. 52 82 IPR017969 GO:0046872
Adu04g01108 1004 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 410 683 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu04g01108 1004 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 758 957 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu04g01108 1004 SUPERFAMILY HAD-like 656 984 IPR036412 -
Adu04g01108 1004 Gene3D - 45 122 - -
Adu04g01108 1004 CDD HMA 137 198 IPR006121 GO:0046872
Adu04g01108 1004 Pfam haloacid dehalogenase-like hydrolase 653 892 - -
Adu04g01108 1004 PRINTS Copper-transporting ATPase 1 signature 47 72 - -
Adu04g01108 1004 PRINTS Copper-transporting ATPase 1 signature 73 96 - -
Adu04g01108 1004 ProSiteProfiles Heavy-metal-associated domain profile. 135 201 IPR006121 GO:0046872
Adu04g01108 1004 SFLD Haloacid Dehalogenase 639 930 - -
Adu04g01108 1004 SFLD p-type atpase 639 930 IPR044492 -
Adu04g01108 1004 Gene3D - 624 935 IPR023214 -
Adu04g01108 1004 SUPERFAMILY Calcium ATPase, transmembrane domain M 396 966 IPR023298 -
Adu04g01108 1004 ProSiteProfiles Heavy-metal-associated domain profile. 47 119 IPR006121 GO:0046872
Adu04g01108 1004 PANTHER ATP7, ISOFORM B 7 997 - -
Adu04g01108 1004 CDD P-type_ATPase_Cu-like 298 974 - -
Adu04g01108 1004 Gene3D - 136 201 - -
Adu04g01108 1004 PRINTS P-type cation-transporting ATPase superfamily signature 493 507 - -
Adu04g01108 1004 PRINTS P-type cation-transporting ATPase superfamily signature 657 671 - -
Adu04g01108 1004 PRINTS P-type cation-transporting ATPase superfamily signature 803 814 - -
Adu04g01108 1004 PRINTS P-type cation-transporting ATPase superfamily signature 878 897 - -
Adu04g01108 1004 PRINTS P-type cation-transporting ATPase superfamily signature 825 835 - -
Adu04g01108 1004 PRINTS P-type cation-transporting ATPase superfamily signature 901 913 - -
Adu04g01108 1004 SUPERFAMILY HMA, heavy metal-associated domain 132 205 IPR036163 GO:0046872
Adu04g01108 1004 Pfam E1-E2 ATPase 438 636 - -
Adu04g01108 1004 Gene3D - 759 809 IPR023299 GO:0000166
Adu04g01108 1004 Gene3D - 664 758 IPR023299 GO:0000166
Adu04g01108 1004 Pfam Heavy-metal-associated domain 50 94 IPR006121 GO:0046872
Adu04g01108 1004 Pfam Heavy-metal-associated domain 138 198 IPR006121 GO:0046872
Adu04g01108 1004 Gene3D - 425 547 - -
Adu04g01108 1004 ProSitePatterns E1-E2 ATPases phosphorylation site. 659 665 IPR018303 -
Adu04g01108 1004 CDD HMA 49 118 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01108 Adu-Chr4 21033162 21038856 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01108 04 21033162 21038856 Adu04g01108 04 21033162 21038856 ECH