Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01087 ATGGCCACACATCTAGAATGCTTCTTCCTCAAACTTGAGCCCCTTCTCACAATGGCAAGAACATTTCTAGTTTGGTTCTTGTGTCTTGGGGTGCCTTGTTTCTTTGTAATTATTGATGGTGGAGTTTATGGAGATCATCAGAACTTGCATCCAAGAACCATTTCTGGTGCCAATCACTACCATAAAGATATAAGAAGATTACAAGCCTTTAAGGCCTCTCTTACTAGACATGCTTCTGTTGCTTCAACACCTTCTTCATTTTCATCCTCTTCTGCTTCTTCCCCTTTGCTATCTGAGGGTGTGAACAATCCACGTGTATACCACGTGACATCGTATGGGGCAGATCCAAGTGGGAATTCAGACAGCACAGAAGCAATTCTTGCAGCCATAGCAGATGCAGCCAAGGTTCCAAGTCAAGGACAGTTGATGCAGGGCATCACTGATCTTGGAGGTGTCCATGTTGATCTTGAGGGTGGTAGCTACCTCATCAGCCGTCCACTGCGCTTGCCGGCCGCCCGTCTAGGGAAcctcatgATACATGGTGGAACTATAAGAGCCTCAAATAACTTTCCAGAAGATGGGTACCTCATTGATTTGTCATCAACCTCTTCTTCTTCTTCTTCTTCTAATAATAATAATAATAATAATAATAATAATGAGAACAATGGAGCTAACTCAGAGAGTTCCCGTTCTTCACGCTACAATTTTGAGTACATAAGCTTCAAGGACCTCTTGTTAGACTCAAACTTCAGAGGTGGGGGCATTTCAGTAATTAACTCACTCAGAACTAACATAGACAACTGTTACATTACACACTTCACCACAAATGGAATTTTAGTCCAAAGTGGTCATGAGACATACATTAGAAACACTTTTCTTGGCCAGTACGTAACCGCAGGAGGTGATAAAAATGAAAAGAATTTCTCCGGGACCGGAATAAGTCTCCTCGGCAACGATAACGCCGTCACGGATGTTGTCATTTTCTCTGCAGCTATAGGAATAATGGTAACCGGTCAGGCCAACACGTTCTCCGGCGTGCATTGTTACAATAAGGCCACCGGATTTGGAGGGACCGGGATATATCTGAAGCTGCCGGGGCTAACACAGACAAGGATTGTGAATTCTTACATGGATTACACGAGTATCGTCGCCGAGGATCCGGTCCAGCTCCATGTCTCTAGCAGTTTCTTCCTTGGTGATGCCAACATTGTCCTTAAATCAGTGAATGGTGTTGTGAATGGAGTCAGCATTGTTGATAACATGTTTTCAGGGTCCGGTTCTGGGGTGGAGATTGTTCAATTGGACCAATCAAAAAACAGTTTCAACCAAATTGATCAAGCTATTGTTGATAGGAACATTGTGAGGGGAATGAATTTGAAGGCCACAGTGGCAAAAATGTCAATTCAAGGGAATGGAACATTATGGAATGTTGATTTTAGTAATGTTCTGCTTTTTCCAAACCTTATCAGAAATGTTCAGTACTCATTAAGCTCTAGTGGTGGAACATTCCCTAATCATGCTTTGAGGAATGTATCTGAGAACAAGGTTGTGATTGAAACAAGTGAAGCAGTGGATGCAAATGTTTTTGTTACTGTGGATCAGAGTATGGTAAATTGA 1617 0.423 MATHLECFFLKLEPLLTMARTFLVWFLCLGVPCFFVIIDGGVYGDHQNLHPRTISGANHYHKDIRRLQAFKASLTRHASVASTPSSFSSSSASSPLLSEGVNNPRVYHVTSYGADPSGNSDSTEAILAAIADAAKVPSQGQLMQGITDLGGVHVDLEGGSYLISRPLRLPAARLGNLMIHGGTIRASNNFPEDGYLIDLSSTSSSSSSSNNNNNNNNNNENNGANSESSRSSRYNFEYISFKDLLLDSNFRGGGISVINSLRTNIDNCYITHFTTNGILVQSGHETYIRNTFLGQYVTAGGDKNEKNFSGTGISLLGNDNAVTDVVIFSAAIGIMVTGQANTFSGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHVSSSFFLGDANIVLKSVNGVVNGVSIVDNMFSGSGSGVEIVQLDQSKNSFNQIDQAIVDRNIVRGMNLKATVAKMSIQGNGTLWNVDFSNVLLFPNLIRNVQYSLSSSGGTFPNHALRNVSENKVVIETSEAVDANVFVTVDQSMVN 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01087 538 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 217 536 - -
Adu04g01087 538 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 18 210 - -
Adu04g01087 538 PANTHER POLYGALACTURONASE QRT3 18 210 IPR039279 GO:0004650
Adu04g01087 538 PANTHER POLYGALACTURONASE QRT3 217 536 IPR039279 GO:0004650
Adu04g01087 538 SUPERFAMILY Pectin lyase-like 105 355 IPR011050 -
Adu04g01087 538 SMART pbh1 260 282 IPR006626 -
Adu04g01087 538 SMART pbh1 174 199 IPR006626 -
Adu04g01087 538 SMART pbh1 412 433 IPR006626 -
Adu04g01087 538 SMART pbh1 317 338 IPR006626 -
Adu04g01087 538 Gene3D - 106 538 IPR012334 -
Adu04g01087 538 MobiDBLite consensus disorder prediction 201 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01087 Adu-Chr4 20476670 20480038 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01087 04 20476670 20480038 Adu04g01087 04 20476670 20480038 ECH