Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01082 ATGTCACTACTGAATAAACTACGGTGTGTCACCATAGATGTTACGGGTACCCTAATGGCTTACAAGGGAGAGCTTGGTGACTACTATTGCATGGCAGCCAAGGCAGTTGGCTATCCATGCCCGGATTACAAACGTGTGCACGAGGGCTTTAAGCTTGCCTATAAGGACATGGCAAAGAAGTATCCATGTTTCGGTTATGCAGCCAAAATGCCAAACATTGTGTGGTGGAAAACTTGCGTGCGAGATTCTTTTGTGAGGGCTGGATATGAATATGATGAGGAGACATTTGAGAAAATTTTCAGACGCATATATGCGGCCTTCGGTTCTTCGGCCCCATACACCGTCTTCCCTGACTCCCAACCATTTCTTAGATGGCTTCGAGGAAAAGGCATAACCGTCGGCATTGTCAGCAACGCAGAGTATCGATATCAGGATGTGATTCTTCCAGCTCTGGGTATAAACCAGAATTCTGAGTGGGACTTTGGTGTGTTTTCCGGTCTGGAAGGCGTGGAGAAGCCGAACCCAAAAATCTATGAGATTGCACTGGAGAGGGCTGGAAACATTGCACCTCAAGAAGCTTTACATATTGGTGACAGCATGCGCAAAGACTATGAGCCGGCTAAGAGCATAGGGATGCAAGCCCTGTTGTTGGATAGATTTAAGACACCGGATGCCGTGGAGTGGAGGAAAGCCGGTGCAGTTGTCCTCCCTGATTTGGTGGCCACGCAGGAATGGCTATCGTTGGAGAAGTCGGCTTGCTAG 762 0.4843 MSLLNKLRCVTIDVTGTLMAYKGELGDYYCMAAKAVGYPCPDYKRVHEGFKLAYKDMAKKYPCFGYAAKMPNIVWWKTCVRDSFVRAGYEYDEETFEKIFRRIYAAFGSSAPYTVFPDSQPFLRWLRGKGITVGIVSNAEYRYQDVILPALGINQNSEWDFGVFSGLEGVEKPNPKIYEIALERAGNIAPQEALHIGDSMRKDYEPAKSIGMQALLLDRFKTPDAVEWRKAGAVVLPDLVATQEWLSLEKSAC 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01082 253 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 8 216 IPR011949 -
Adu04g01082 253 CDD HAD_dREG-2_like 119 227 - -
Adu04g01082 253 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 128 211 IPR006439 -
Adu04g01082 253 Pfam haloacid dehalogenase-like hydrolase 8 210 - -
Adu04g01082 253 SUPERFAMILY HAD-like 7 238 IPR036412 -
Adu04g01082 253 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 10 249 - -
Adu04g01082 253 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 7 18 IPR006439 -
Adu04g01082 253 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 126 139 IPR006439 -
Adu04g01082 253 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 159 175 IPR006439 -
Adu04g01082 253 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 206 219 IPR006439 -
Adu04g01082 253 PANTHER OS02G0173600 PROTEIN 1 251 - -
Adu04g01082 253 Gene3D - 10 221 IPR023214 -
Adu04g01082 253 SFLD Haloacid Dehalogenase 10 249 - -
Adu04g01082 253 Gene3D - 23 108 IPR044924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01082 Adu-Chr4 20284221 20287450 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01082 04 20284221 20287450 Adu04g01082 04 20284221 20287450 ECH