Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04358 ATGGCGCCGAGCGTCCGAGACATCCAGCTAACTCCCGCCGGTAAAACCTCCCTCGCCGCCGCCGCCGCCGCCGACGACTCCGGTGACCTCGAAGATGTTCGCCTTCTCGATTCCTACGATAAGGACGACGTTGAAGCAGCAGCAACAACATCAACGAAGCGGATTCAGGTCAGAGTCACCGGCATGACCTGTGCCGCATGTTCCAACTCCGTCGAATCCGCTCTCATGTCCGTTGACGGCGTCGTTTCCGCTTCCGTCGCACTTCTCCAGAACCGCGCCGACGTCGTTTTCAATCCGAGCCTCGTCAAGGATGAAGACATTAAGAATGCGGTTGAAGATGCAGGTTTCGAAGCCGAGGTTTTGCCGGAACCTCAACAAAGCGCGACTGGAACGAAGCCAAGTGGTGCTACTCTTGTAGGACAGTTCACCATCACGGGGATGACGTGTGCGGCGTGCGTGAACTCCGTGGAAGGGATCCTCAAGGACCTCGGTGGTGTGAAGAAGGCTGTGGTGGCTTTGGCTACTTCGTTAGGTGAGGTTGAGTATGATCCAAATGTGATTAGCAAGGATGAGATCGTCCGTGCGATTGAAGATGCTGGGTTCGAGGCTTCGTTTGTGCAGAGCAATGAGCAGGACAAGGTGGTGCTAGGTGTTGTTGGTGTGTACAGTTTGGGTGATGCTCAGGTTCTGGAAGGTATGCTGAGTGGGATGAAAGGTGTGAGGCAGTTCCGATTCAACATCGTGTCGAATGAGTTGGATGTTGTGTTTGATCCCGAAGTTATTAGGCCTCGATCACTTGTTGATGGGATCCAGCTTGGGAGTAAAGGGAAATTTAGGTTGAATGTTAGGAACCCTTATGCCAGAATGGCTTCTACAGATGGTGCCGAGAGCTCAGCTATGTTTCGGCTTTTCACTTCCAGCCTGTTTCTTAGTGTTCCTCTCTTCTTCATGGGGGTAGTTTGTCCTCACATACCATTCATATACTCCTTATTACTCAGGAGATGTGGACCGTTCCTCATGGGTGATTGGTTGAAATGGGCATTGGTGAGTGTCATCCAATTTGTGATTGGAAGGCGCTTCTACATTGCAGCGGGCAGGGCTCTTAGGAATGGTTCAACAAACATGGATGTCCTGGTTGCTTTAGGAACTACAGCCTCTTATGTTTATTCTGTTTGTGCTCTTCTGTATGGTGCTGTTACTGGATTTTGGTCTCCAACATACTTTGAAACAAGTGCTATGCTCATAACATTTGTATTGTTGGGCAAGTATTTGGAATGCCTTGCCAAGGGAAAGACATCTGATGCCATTAAGAAGTTAGTGGAACTTGCTCCTGCAACTGCTTTATTGATTGTAAAAGATAAAGGTGGTAAATTAATTGAGGAAAGGGAAATAGACTCCTTACTCATTGAACCTGGTGATACATTAAAAGTTCTTCCTGGTACAAAGATTCCCGCTGATGGTATTGTTAAGTGGGGATCAAGTTATGTAAATGAGAGCATGGTGACTGGTGAATCTGTACCTGTTTTGAAAGAGCTCAATGCATCAGTTATTGGAGGTACAATCAATTCACATGGTGTCCTGCACATTCAAGCAACTAAAGTAGGATCCGATACAGTTTTGAGTCAGATAATTAGTTTGGTGGAGACAGCCCAGATGTCCAAAGCTCCCATTCAGAAGTTTGCTGATTATGTAGCAAGCATATTTGTTCCTACTGTTGTGGCTTTGTCATTATTGACATTCCTGTGTTGGTATACTGCTGGGGCTCTTGAAGCTTACCCAAAAGAATGGCTACCAGAAAATGGAAATCATTTCGTTTTTGCTCTCATGTTTTCGATATCTGTTGTGGTGATTGCATGCCCCTGTGCCCTTGGTTTGGCAACACCAACTGCTGTCATGGTGGCAACAGGGGTTGGGGCTAACAATGGTGTGTTAATTAAAGGAGGAGATGCCTTGGAAAGGGCTCAGATGGTGAAGTATGTTATATTTGATAAGACAGGCACTCTAACTCAAGGGAAAGCCACTGTTACTACTGTCAAGGTGTTCACAGGAATGGAGCGAGGAGAATTTCTTACACTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCATTGGGAAAAGCAATATTACAATATGCACGCCATTTTCATTTCTTTGATGAGTCCTCTACTACCAATGGTACTCTGAATGATGCGAAGGAATTAAGTTCTGGGTGGCTTCATGATGTATCAGATTTCTCTGCTCTCCCAGGAAGAGGTGTCCAGTGCTTTATAGATGGGAAGCGCATTTTGGTTGGTAACAGAAAGCTGCTGTCAGAAAATGGTATAGATATTTCCACTGAAGTGGAAAATTTTGTGGTAGAGCTTGAAGAAAGTGCAAAGACAGGAATACTGGTAGCATATGATGACGTTCTAACTGGAGTGTTGGGTGTTGCAGACCCACTAAAGAGAGAAGCTTCTGTTGTTATAGATGGCCTCCATAAAATGGGAGTCATACCTGTTATGGTTACAGGAGACAATTGGAGAACAGCTCGAGCTGTTGCAAAGGAGCTTGGAATTCAAGATGTGAGGGCAGAGGTTATGCCGGCAGGAAAGGCGGATGTTGTTCGATCCTTTCAAAAGGATGGGAGCGTAGTAGCAATGGTGGGTGATGGCATCAATGACTCTCCTGCATTAGCCGCTGCAGATGTTGGTATGGCAATTGGAGCTGGGACTGATATTGCAATAGAAGCCGCTGACTATGTGCTGATGAGATATAACTTGGAAGATGTGATCACAGCCATTGATCTTTCTAGGAAGACATTTTCTCGTATTCGATTGAACTATGTATTTGCCATGGCTTACAATGTTATTGCAATACCAGTTGCTGCGGGAGTGTTTTTCCCTTCTCTGGGGATCCAGCTGCCACCGTGGGTTGCTGGTGCATGCATGGCTCTCTCCTCTGTAAGTGTTGTATGCTCTTCTTTGCTTTTGAGAAGATATAGAAAACCCAGACTTACCGCAATACTTGAAATAGTTGTAGAATAA 3024 0.462 MAPSVRDIQLTPAGKTSLAAAAAADDSGDLEDVRLLDSYDKDDVEAAATTSTKRIQVRVTGMTCAACSNSVESALMSVDGVVSASVALLQNRADVVFNPSLVKDEDIKNAVEDAGFEAEVLPEPQQSATGTKPSGATLVGQFTITGMTCAACVNSVEGILKDLGGVKKAVVALATSLGEVEYDPNVISKDEIVRAIEDAGFEASFVQSNEQDKVVLGVVGVYSLGDAQVLEGMLSGMKGVRQFRFNIVSNELDVVFDPEVIRPRSLVDGIQLGSKGKFRLNVRNPYARMASTDGAESSAMFRLFTSSLFLSVPLFFMGVVCPHIPFIYSLLLRRCGPFLMGDWLKWALVSVIQFVIGRRFYIAAGRALRNGSTNMDVLVALGTTASYVYSVCALLYGAVTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLIVKDKGGKLIEEREIDSLLIEPGDTLKVLPGTKIPADGIVKWGSSYVNESMVTGESVPVLKELNASVIGGTINSHGVLHIQATKVGSDTVLSQIISLVETAQMSKAPIQKFADYVASIFVPTVVALSLLTFLCWYTAGALEAYPKEWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQMVKYVIFDKTGTLTQGKATVTTVKVFTGMERGEFLTLVASAEASSEHPLGKAILQYARHFHFFDESSTTNGTLNDAKELSSGWLHDVSDFSALPGRGVQCFIDGKRILVGNRKLLSENGIDISTEVENFVVELEESAKTGILVAYDDVLTGVLGVADPLKREASVVIDGLHKMGVIPVMVTGDNWRTARAVAKELGIQDVRAEVMPAGKADVVRSFQKDGSVVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAADYVLMRYNLEDVITAIDLSRKTFSRIRLNYVFAMAYNVIAIPVAAGVFFPSLGIQLPPWVAGACMALSSVSVVCSSLLLRRYRKPRLTAILEIVVE 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04358 1007 CDD P-type_ATPase_Cu-like 302 977 - -
Adu03g04358 1007 SUPERFAMILY HMA, heavy metal-associated domain 50 124 IPR036163 GO:0046872
Adu03g04358 1007 Gene3D - 628 938 IPR023214 -
Adu03g04358 1007 SFLD C1.7: P-type atpase like 643 933 - -
Adu03g04358 1007 SUPERFAMILY HMA, heavy metal-associated domain 209 270 IPR036163 GO:0046872
Adu03g04358 1007 CDD HMA 56 119 IPR006121 GO:0046872
Adu03g04358 1007 ProSiteProfiles Heavy-metal-associated domain profile. 139 205 IPR006121 GO:0046872
Adu03g04358 1007 PANTHER ATP7, ISOFORM B 13 1000 - -
Adu03g04358 1007 SUPERFAMILY Calcium ATPase, transduction domain A 461 547 IPR008250 -
Adu03g04358 1007 Gene3D - 140 205 - -
Adu03g04358 1007 ProSitePatterns Heavy-metal-associated domain. 59 89 IPR017969 GO:0046872
Adu03g04358 1007 Gene3D - 52 123 - -
Adu03g04358 1007 SUPERFAMILY HAD-like 660 987 IPR036412 -
Adu03g04358 1007 ProSitePatterns Heavy-metal-associated domain. 144 173 IPR017969 GO:0046872
Adu03g04358 1007 Gene3D - 429 551 - -
Adu03g04358 1007 Pfam E1-E2 ATPase 442 640 - -
Adu03g04358 1007 ProSiteProfiles Heavy-metal-associated domain profile. 54 120 IPR006121 GO:0046872
Adu03g04358 1007 SFLD p-type atpase 643 933 IPR044492 -
Adu03g04358 1007 Pfam haloacid dehalogenase-like hydrolase 657 895 - -
Adu03g04358 1007 CDD HMA 141 204 IPR006121 GO:0046872
Adu03g04358 1007 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 414 683 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu03g04358 1007 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 753 966 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu03g04358 1007 PRINTS P-type cation-transporting ATPase superfamily signature 497 511 - -
Adu03g04358 1007 PRINTS P-type cation-transporting ATPase superfamily signature 661 675 - -
Adu03g04358 1007 PRINTS P-type cation-transporting ATPase superfamily signature 806 817 - -
Adu03g04358 1007 PRINTS P-type cation-transporting ATPase superfamily signature 828 838 - -
Adu03g04358 1007 PRINTS P-type cation-transporting ATPase superfamily signature 881 900 - -
Adu03g04358 1007 PRINTS P-type cation-transporting ATPase superfamily signature 904 916 - -
Adu03g04358 1007 Pfam Heavy-metal-associated domain 57 117 IPR006121 GO:0046872
Adu03g04358 1007 Pfam Heavy-metal-associated domain 142 202 IPR006121 GO:0046872
Adu03g04358 1007 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 375 990 IPR027256 GO:0006812|GO:0016021|GO:0019829
Adu03g04358 1007 ProSitePatterns E1-E2 ATPases phosphorylation site. 663 669 IPR018303 -
Adu03g04358 1007 PANTHER HEAVY METAL P-TYPE ATPASE 13 1000 - -
Adu03g04358 1007 TIGRFAM TIGR00003: copper ion binding protein 141 203 IPR006122 GO:0005507
Adu03g04358 1007 TIGRFAM TIGR00003: copper ion binding protein 55 118 IPR006122 GO:0005507
Adu03g04358 1007 ProSiteProfiles Heavy-metal-associated domain profile. 213 271 IPR006121 GO:0046872
Adu03g04358 1007 Gene3D - 762 812 IPR023299 GO:0000166
Adu03g04358 1007 Gene3D - 668 761 IPR023299 GO:0000166
Adu03g04358 1007 PRINTS H+-transporting ATPase (proton pump) signature 853 869 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu03g04358 1007 PRINTS H+-transporting ATPase (proton pump) signature 881 897 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu03g04358 1007 PRINTS H+-transporting ATPase (proton pump) signature 912 937 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu03g04358 1007 SUPERFAMILY HMA, heavy metal-associated domain 140 210 IPR036163 GO:0046872
Adu03g04358 1007 SUPERFAMILY Calcium ATPase, transmembrane domain M 398 968 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04358 Adu-Chr3 132547465 132553786 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04358 03 132547465 132553786 Adu03g04358 03 132547465 132553786 ECH