Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04036 ATGGTTGGCACCAAGCCTTCGACTTGGCAAGCCTTGCTTGCAATTTTGTTAAGAAGAAGAACAAAGTCGTGCCCATCTTCATCTGAAGGCATGAAAATCCCAAGAGAGGCAGTTGTTGAAGAGCTGAAGAGACAGCTATGGCTGGCAGTGCCTCTCTGCTCAGTGGCTTTCCTGCAATACAGTCTCCAGACCATCTCCATCATGTTTGTTGGTCATCTCGGTACTCTCCCTCTTTCCGGAGCTTCCATGGCGACCTCCTTTGCCGCCGTTACAGGATTCACCTTACTGACAGGATTAACCGGTGCACTGGACACATTTTGTGGACAATCGAATGGGGCAGGGCAGTACCAGATGCTTGGCATACACTTGCAGAGATCCATGCTTGTTGTTTCAGTCGTCAGTGTTTTCGTCGCCATCATCTGGGCCAACACGGAGCCTATTCTAATTGCGATGCGCCAAGACAAAGCCATAGCCAACCAAGCTGGCAAGTATGCCCGCTGCTTGATCCCAAGCCTCTTCGCGCATGGCCTTCTTCAGTCCATTCTCAGGTTCTTGCAAACCCAGAGCATTGTCTTCCCAATGGTCATAACCTCTGCACTTGCGGCGCTGCTCCACATCCTTCTCTGCTGGCTTCTTGTATTCAAAACTCCCCTGGGGAGCAGGGGGGCACCCATATCTATTTCCATATGTTATTATCTGAATCTTCTCTTCATCTCCTTCTATATCAAATACTCTTCTTCTTGCAAACAATCTTGGACTGGCTTTTCCAAAAAGTCCCTAAATGGAGTCTTCTCCTTCCTTAAACTTGCTGTTCCTTCGGCTCTTATGCTCTGCCTGAAAGTTTGGACATTCGAACTCGTAGTTATCTTGTCTGGTCTTCTTCCGAACCCAGCATTAGAAACTTCAGTTCTTTCAATATGCCTTAATACATTTACTTTAGCTTGGATGATCCCTTTTGGATTCAGTGCTGCTGTAAGCACACGCGTGTCGAATGAACTAGGAGGTGGAAATCCAGAGGCAGCACGGGTAGCAGTTGGCGTGGTGTTATGCATGGTGTTCATTGAAGGGATCTTGTTAGCTTCAATCATGATTATGCTGAGGAACATGTGGAGCCGTATTTACAGTAATGACAAACAAGTAATCAGAGATGTGTCGGCGACGACGCCAATTCTGGCAGTTTCGTGCTTTCTAGATGGAATACAAAGTGCACTTTCAGGTATTGCTTCAGGATGTGGGTGGCAGCGAATAGGTGCATATGTGAATCTTGGCTCATTCTATCTTGTGGGCGTTCCTTGCTCTGTCCTGTTAGGATTTGTTGCGCATATGAAAGCCAAGGGGCTGTGGTTGGGGATCATAGCTGCATTCGTTGTGCAAGTAACATTTTACGCTATCATCACCATTCGAACCAGTTGGGACCAACAGGCAAGGATAGCTGAAAGCAGAGTTAAGGAGTCAACCATGTCGCCAAAGACAGAATGTGAAGTCTAA 1488 0.4718 MVGTKPSTWQALLAILLRRRTKSCPSSSEGMKIPREAVVEELKRQLWLAVPLCSVAFLQYSLQTISIMFVGHLGTLPLSGASMATSFAAVTGFTLLTGLTGALDTFCGQSNGAGQYQMLGIHLQRSMLVVSVVSVFVAIIWANTEPILIAMRQDKAIANQAGKYARCLIPSLFAHGLLQSILRFLQTQSIVFPMVITSALAALLHILLCWLLVFKTPLGSRGAPISISICYYLNLLFISFYIKYSSSCKQSWTGFSKKSLNGVFSFLKLAVPSALMLCLKVWTFELVVILSGLLPNPALETSVLSICLNTFTLAWMIPFGFSAAVSTRVSNELGGGNPEAARVAVGVVLCMVFIEGILLASIMIMLRNMWSRIYSNDKQVIRDVSATTPILAVSCFLDGIQSALSGIASGCGWQRIGAYVNLGSFYLVGVPCSVLLGFVAHMKAKGLWLGIIAAFVVQVTFYAIITIRTSWDQQARIAESRVKESTMSPKTECEV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04036 495 Pfam MatE 51 211 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu03g04036 495 Pfam MatE 272 434 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu03g04036 495 PANTHER MULTIDRUG RESISTANCE PROTEIN 33 481 - -
Adu03g04036 495 TIGRFAM matE: MATE efflux family protein 55 448 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu03g04036 495 CDD MATE_eukaryotic 41 476 IPR045069 GO:0042910|GO:1990961
Adu03g04036 495 PANTHER PROTEIN DETOXIFICATION 33 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04036 Adu-Chr3 129463426 129468454 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04036 03 129463426 129468454 Adu03g04036 03 129463426 129468454 ECH
Adu05g02722 05 94696516 94700945 Adu03g04036 03 129463426 129468454 PCT