Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03425 ATGTTGGTTAATATCATGCCTCCATCAACGACTAACGAATGGACACAGACTCAAATCATAGATGATCAAAATCACAACACCAAAGCTGAAGCTCCACCACCATCATCGTCATCATCAGCTGCTAGGGTTATGGAAAAACAAGGTCAAGAACATGTTCAGCAGCAGCAGCAACAAGCTCTCAAGTGCCCTCGCTGCGATTCATCCAACACCAAATTCTGCTACTACAACAACTACAGCTTATCGCAGCCTAGACACTTCTGCAAAGCCTGCAAGCGATACTGGACAAGAGGTGGAACCCTCCGCAACGTCCCCGTCGGCGGTGGCTGCAGAAAAAACACCAAGCGTCTCAAGCGCCAATCATCTTCTTCCATCGATGCCACTCCTTCTCCTTCTTCTTCTTCCACTCATCCTCCGGCTTCTAATATCAACCCTTTGTTTTATGGGGTACCTAGTAGTAATAATAATAACAACAACAATAACTCTTGTGATTTGTTGAACCTACCTTCTTTCCCTGGGTTCAGAGTGAGTTCTGGGTATGATAATGATGTTCAGCCTCACCTAAGTGGGTTAGGTTTTTCATCAGGGATCATGTCCAATATGGAAGCTACTGGATTTGGTTCAAATGAGAGTAACTCATTTCTTTCGGCCTACAATTCCATCTTCGGTTCGTGTTCTTCATCAGCTTCTACTACCTTGCTGAGTTCCACTCTACTGCAGCATAAATTCATGAATGGTGGTGGATTCCAAGGGCTAGCTACTCCTGAGGTTGAAGAGATGCAAATGAGAGAGAGGCGTGAGGGAGAAAGAGGAGGAGTCATGGGTTGTTCTTCTTTGAAAGAAGTGAAAGGTGAATTATTGGGAGAAGAAAGAGGGAGAGAGAGGTTGGAGTGGCAGAATCAGATGATGGAACATACCATGGGCTTTTCTGATCCCTCTTCTTCGCTTTATTGGAGCACATCATCATCACCCATGGCTGCTTCTTCTTGGAATGATCAACCCAATATTGGTCCTTCTGTCACTTCACTCATCTAG 1032 0.4506 MLVNIMPPSTTNEWTQTQIIDDQNHNTKAEAPPPSSSSSAARVMEKQGQEHVQQQQQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNTKRLKRQSSSSIDATPSPSSSSTHPPASNINPLFYGVPSSNNNNNNNNSCDLLNLPSFPGFRVSSGYDNDVQPHLSGLGFSSGIMSNMEATGFGSNESNSFLSAYNSIFGSCSSSASTTLLSSTLLQHKFMNGGGFQGLATPEVEEMQMRERREGERGGVMGCSSLKEVKGELLGEERGRERLEWQNQMMEHTMGFSDPSSSLYWSTSSSPMAASSWNDQPNIGPSVTSLI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03425 343 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-LIKE 8 326 - -
Adu03g03425 343 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 8 326 IPR045174 GO:0003700|GO:0006355
Adu03g03425 343 ProSiteProfiles Zinc finger Dof-type profile. 60 114 IPR003851 GO:0003677|GO:0006355
Adu03g03425 343 MobiDBLite consensus disorder prediction 25 55 - -
Adu03g03425 343 MobiDBLite consensus disorder prediction 323 343 - -
Adu03g03425 343 MobiDBLite consensus disorder prediction 104 150 - -
Adu03g03425 343 MobiDBLite consensus disorder prediction 119 150 - -
Adu03g03425 343 Pfam Dof domain, zinc finger 58 114 IPR003851 GO:0003677|GO:0006355
Adu03g03425 343 ProSitePatterns Zinc finger Dof-type signature. 62 98 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03425 Adu-Chr3 121483892 121485085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03425 55 205 C2C2-Dof Transcription Factor Family AT5G65590 47.619 5.31e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Adu03g03425 zf-Dof 7.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03425 - - aip:107631218 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03425 03 121483892 121485085 Adu03g03425 03 121483892 121485085 ECH
Adu03g03425 03 121483892 121485085 Adu10g00253 10 3106178 3107236 PCT