Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03380 ATGGGTTTGAGTTCCAAGCAGGTTTCAAGGAGTAGTAGTGGACTTGATTGGAACCAAGCCTTATTGGAATCACAGAAATTGGAGCTTCCAATTCCAAAGCCTCATCATATTATGAAGAAACAACAACAGAATCAATCATCATCGTCATCATCAGAGCCAATGAAGTGTCCAAGATGTGAATCTACCAACACAAAGTTCTGTTACTACAACAATTACAACAAGTCTCAGCCTCGCTATTTATGTAGAACTTGCAAGAGGCACTGGACCAAAGGTGGAACTTTGCGCAATGTTCCAGTTGGTGGTGGAAGAAAGAACAAAAGGGTCAAAAAATCAACCGCCACTGCAACCGCCACAGCCACCGCCACCACCTCTACTTGCACCACAAGCATCAGAATTCAAGCTCCTTCTCTTGCAATGGATGATCACAAAAACATAGCTTCTCCTTCTCCTTCTTCTTCTTCTTCCCTCTATCAAGTTTCAGTTTCAACCTCTTTGCAATCCGCCAATGTTTATAATAACTGTGGTGGTGAAGAGTTTAAAGCAATAGAGGAACCAAGCATGCACAGCATAATGGCTACCACTACTTCTACACAACCATGGGAGATACCAGCAGCAACAATGGAAATGTCAAACTATTGGGGTTGGGAGGACATTGATTCTTTGGTCTCTACTGATCCGAACAATAATCATCCTTGGGATGATTCTGATGATATCAAACCCTGA 723 0.4246 MGLSSKQVSRSSSGLDWNQALLESQKLELPIPKPHHIMKKQQQNQSSSSSSEPMKCPRCESTNTKFCYYNNYNKSQPRYLCRTCKRHWTKGGTLRNVPVGGGRKNKRVKKSTATATATATATTSTCTTSIRIQAPSLAMDDHKNIASPSPSSSSSLYQVSVSTSLQSANVYNNCGGEEFKAIEEPSMHSIMATTTSTQPWEIPAATMEMSNYWGWEDIDSLVSTDPNNNHPWDDSDDIKP 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03380 240 ProSiteProfiles Zinc finger Dof-type profile. 54 108 IPR003851 GO:0003677|GO:0006355
Adu03g03380 240 MobiDBLite consensus disorder prediction 28 55 - -
Adu03g03380 240 Pfam Dof domain, zinc finger 53 106 IPR003851 GO:0003677|GO:0006355
Adu03g03380 240 MobiDBLite consensus disorder prediction 38 55 - -
Adu03g03380 240 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 40 203 IPR045174 GO:0003700|GO:0006355
Adu03g03380 240 MobiDBLite consensus disorder prediction 95 117 - -
Adu03g03380 240 PANTHER OS06G0284500 PROTEIN 40 203 - -
Adu03g03380 240 ProSitePatterns Zinc finger Dof-type signature. 56 92 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03380 Adu-Chr3 120830190 120831149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03380 54 118 C2C2-Dof Transcription Factor Family AT5G60200 68.182 3.06e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Adu03g03380 zf-Dof 4.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03380 - - gmx:100806358 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03380 03 120830190 120831149 Adu10g00299 10 3531634 3533403 PCT