Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02008 ATGAGAACTCAACGGCCTCACTGTCTCCTCTTCCTCTCCCTTCTCTGCTTGCTAGCCACATTCTCGAACCTCCACCGGACAGTCACCGCCTTTTACGATGCCGATTCTCCCGCTGCACCCGCAGCTGACGACGGCGATACAACCTTCATCCGAACGAGCTGCAACAACACGCTTTACCCGGACGTCTGCTACTCCTCCCTCTCTCGCTACGCCAATGCGGTCCAGCAGGATCCCGGCCAGCTCGCTCGCGTCGCTATCGCCGTCACACTCTCTAAGGTCCACCGCACTGCCTCCTACGTCTCCAACCTCACTCGCGACGCCGACTACACCGCCGATTCGCGCGCAACCTCCGCGCTTCACGACTGTTTCACTAATCTCGGTGACGCCGTCGACGAAATTCGCGGTTCGCTGAAGCAGATGCGGCAAATTGGAGCCGCTGGAACCGGCGCCGGCTCGTTCCTGTTCCAGATGAGCAACGTACAGACGTGGATGAGCGCCGCACTCACCGACGAAGAGACTTGTACGGACGGATTCCAGGATGTGGCGGAGTGTCCGGTTAAGGCGGACGTGTGCGACCGCGTAACGAAGGTGAAGAAGTTCACGAGCAACGCTTTGGCTCTCGTCAATACCTACGCAAACAAGGGAGGACCGTGA 654 0.5933 MRTQRPHCLLFLSLLCLLATFSNLHRTVTAFYDADSPAAPAADDGDTTFIRTSCNNTLYPDVCYSSLSRYANAVQQDPGQLARVAIAVTLSKVHRTASYVSNLTRDADYTADSRATSALHDCFTNLGDAVDEIRGSLKQMRQIGAAGTGAGSFLFQMSNVQTWMSAALTDEETCTDGFQDVAECPVKADVCDRVTKVKKFTSNALALVNTYANKGGP 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02008 217 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 211 IPR035513 -
Adu03g02008 217 SMART PMEI_2 45 207 IPR006501 GO:0004857
Adu03g02008 217 Gene3D Invertase/pectin methylesterase inhibitor family protein 45 211 IPR035513 -
Adu03g02008 217 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 10 214 - -
Adu03g02008 217 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 214 - -
Adu03g02008 217 TIGRFAM PME_inhib: pectinesterase inhibitor domain 36 211 IPR006501 GO:0004857
Adu03g02008 217 CDD PMEI-like_3 52 213 - -
Adu03g02008 217 Pfam Plant invertase/pectin methylesterase inhibitor 49 207 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02008 Adu-Chr3 37194914 37195865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02008 35 209 Carbohydrate Esterase AT1G53840 24.725 1.99e-14 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02008 03 37194914 37195865 Adu03g02008 03 37194914 37195865 ECH