Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00524 ATGGAAGGGCAAGAAGCATTGAAAGGTACTAGTAGTTTTTCTTCAAAGTGTTCAGACTGTGGGAACCAAGCAAAGAAAGATTGCTCATACACAAGGTGCAGAACTTGCTGCAAGAACAAAGGATTTCACTGCCCAACCCATGTTAGAAGCACTTGGATCCCTGTCGATAGAAGACGCCATAAATCATCCTCATCATCATCACTAGTACTCATGGATCATCATCACTCTTCTCTCACTACAAATCTACACTTCCTTCATCATCAACATATCCCTAAAAGGCACAAGCACACCCCATATTCATCATCAGAGGAGTTTCCAGCAAGTATGAGTTCGGTGGCAATATTCAGGTGCGTTAGGGTGCGTTCGATGGATGAAAGTGTTAATGAAATTGCGTACCAAACATCTGTCAACATTGGAGGACATGTTTTCAGTGGTCTTCTTTATGATCAAGGCCCTCATCAACCACCACCATCAACCTCCATAGACCCTCACCTACACAGTAATACTAATAATCTCAATCTTATGATGATGAGTAATAGTAGTAATAATAATGTTCCAACCATTATTGATGCTCCTCCTCTTCCTCACGATCAGCCTTTTCTATCTTCTTCTACTTCTTTTGTTAGGCCTCCTACTATGCCATATTATTTTTCACACCCTCCTAAACCTTGA 672 0.4107 MEGQEALKGTSSFSSKCSDCGNQAKKDCSYTRCRTCCKNKGFHCPTHVRSTWIPVDRRRHKSSSSSSLVLMDHHHSSLTTNLHFLHHQHIPKRHKHTPYSSSEEFPASMSSVAIFRCVRVRSMDESVNEIAYQTSVNIGGHVFSGLLYDQGPHQPPPSTSIDPHLHSNTNNLNLMMMSNSSNNNVPTIIDAPPLPHDQPFLSSSTSFVRPPTMPYYFSHPPKP 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00524 223 Pfam Domain of unknown function (DUF702) 15 153 - -
Adu03g00524 223 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 105 152 IPR006511 -
Adu03g00524 223 MobiDBLite consensus disorder prediction 1 25 - -
Adu03g00524 223 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 10 186 IPR007818 GO:0003700|GO:0006355
Adu03g00524 223 PANTHER BNAC01G23660D PROTEIN 10 186 - -
Adu03g00524 223 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 16 58 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00524 Adu-Chr3 4885964 4887130 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Adu03g00524 DUF702 1.7e-50 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00524 03 4885964 4887130 Adu03g00524 03 4885964 4887130 ECH
Adu03g00524 03 4885964 4887130 Adu05g00866 05 10761510 10764001 ECH
Adu08g00115 08 1565795 1568290 Adu03g00524 03 4885964 4887130 ECH