Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03222 ATGGTGAAGCTATGTGGAATAGGGGCAGGGTATGTAGGGGGTCCTACAATGGCAGTTATTGCTCTAAAATGCCCCTCCATTGAAGTGGCTGTGGTTGACATATCTCAATCTCGCATATCAGCATGGAACAGTGACAAACTCCCAATCTATGAGCCTGGCCTAGAAAATGTGGTGAAACAATGCAGAGGGAAAAATCTCATCTTCAGCACAGATGTGGAGAGGCATGTCCAAGAAGCTGACATCATCTTTGTGTCGGTGAACACGCCGACAAAGGCGAGAGGCCTTGGAGCCGGCAAGGCGGCTGACTTGACTTATTGGGAGAGCGCAGCCCGGATGATCGCTGATGTGTGCACCTCAGACAAGATTGTTGTTGAAAAATCTACTGTCCCGGTGCGCACGGCCGAGGCAATAGAACAAATCTTAGCACATAAGAGCAAGGGAATCAAGTATCAGATTCTGTCGAATCCAGAGTTTCTTTCAGAGGGGACAGCTGTACAGGACCTTCTAGAACCTGACAGGGTCCTAATTGGAGGGAATGAAGGCCCTGAAGGCCAAGAAGCAATCAAGAAACTGAAGGATATATATGCTCATTGGGTGAGTGAAGATAAAATCATAACAACAAACATTTGGTCTGCAGAACTTTCCAAGTTAGCTGATAATGCATTCTTGGCTCAAAGGATCTCATCAATCAATGCAATGTCAGCACTGTGTGAGGCCACTGGTGCTCAAGTCTCTCAGGTTTCCCTTGCACTAAGCAAGAACCCGAAAATCGGGCCGAGATTCCTGAATGCCAGTGTTGGCTTTGGTGGTTCTTGTTTCCAGAAGGACATACTCAATTTGGTGTATATTTGTGAATGTAATGGCCTTGTCGAGGTGGCGAATTACTGGAAGCAAGTGATCAAGGTGAATGACTACCAGAAGAGCCGATTCGTCCAACGAGTCGTGTCATCCATGTTCAACACAGTTTCTGGTAAGAAGATTGCAGTTCTTGGATTTGCATTCAAGAAGGACACCAGTGACACTAGAAAAACTCCTGCTATTGATGTTTGCAAAGGTCTTTTAGGTGATGATGCATGCTTGAGCATATATGATCCGCGAGTGAGCGCGGATCAGATCAAGAAGGATTTGTCAATGAATAATGTTCAATGGGACCATCCAATTCACCTGCAGCCATTGAGTTCTAGCTCTTCCAATGGCTTGGAACATGTTGACATAGCTGAAGATGCTTATGAGGCAACTAAGGATGCTCATGGTATATGCATTCTTACAGAGTGGGATGAGTTTAAGGGAATTGATTTCCAGAGAGTGTTTGATGACATGCAGAAGCCAGCATTTGTTTTCGATGGTAGGAACATTTTGGATGTTGGGAAACTGAGGGAGATTGGGTTCATTGTTTACTCAATTGGGAGCCCAGTAGAACAATGGCTCAACAACTCTGTCAATTCAGCAGTGCCCTTTTGA 1461 0.4538 MVKLCGIGAGYVGGPTMAVIALKCPSIEVAVVDISQSRISAWNSDKLPIYEPGLENVVKQCRGKNLIFSTDVERHVQEADIIFVSVNTPTKARGLGAGKAADLTYWESAARMIADVCTSDKIVVEKSTVPVRTAEAIEQILAHKSKGIKYQILSNPEFLSEGTAVQDLLEPDRVLIGGNEGPEGQEAIKKLKDIYAHWVSEDKIITTNIWSAELSKLADNAFLAQRISSINAMSALCEATGAQVSQVSLALSKNPKIGPRFLNASVGFGGSCFQKDILNLVYICECNGLVEVANYWKQVIKVNDYQKSRFVQRVVSSMFNTVSGKKIAVLGFAFKKDTSDTRKTPAIDVCKGLLGDDACLSIYDPRVSADQIKKDLSMNNVQWDHPIHLQPLSSSSSNGLEHVDIAEDAYEATKDAHGICILTEWDEFKGIDFQRVFDDMQKPAFVFDGRNILDVGKLREIGFIVYSIGSPVEQWLNNSVNSAVPF 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03222 486 Gene3D - 1 208 - -
Adu01g03222 486 SMART UDPG_MGDP_dh_C_a_2_a 328 455 IPR014027 GO:0016616|GO:0051287
Adu01g03222 486 PIRSF UDPglc_GDPman_dh 2 470 IPR017476 GO:0016616
Adu01g03222 486 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 4 451 IPR017476 GO:0016616
Adu01g03222 486 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 454 IPR014027 GO:0016616|GO:0051287
Adu01g03222 486 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 479 IPR028356 GO:0003979
Adu01g03222 486 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 201 IPR036291 -
Adu01g03222 486 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 3 1 479 - -
Adu01g03222 486 Gene3D - 209 240 - -
Adu01g03222 486 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 209 309 IPR008927 -
Adu01g03222 486 Gene3D - 241 483 - -
Adu01g03222 486 PIRSF UDPglc_DH_euk 1 482 IPR028356 GO:0003979
Adu01g03222 486 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 304 IPR014026 GO:0016616|GO:0051287
Adu01g03222 486 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 185 IPR001732 GO:0016616|GO:0051287
Adu01g03222 486 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 315 466 IPR036220 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03222 Adu-Chr1 104625904 104628427 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02886 04 116965860 116967344 Adu01g03222 01 104625904 104628427 ECH
Adu01g03222 01 104625904 104628427 Adu01g03222 01 104625904 104628427 ECH