Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01024 ATGTCTCCCACAACTCCCTCCCTTCTCGACACCCTCCTCTGCCAAGAAGAACACGACGACACCTTTGACGACACCCAAAACGACGCGTCGTTCCACCTCAACGACAACCACCACGACGAATCACCGTCGTTTTGCCCCGCAAAGCTCCAATCTTTTCCTCATCCCGTTCTGCATGACAACGACCTGTTCTGGGAACACGACGAGCTCGCCTCCTTAATCTCCAAAGAGGAAGAGACCCACGCCGCCGCTGGTAACGACGACGACCACCGTGGACTTCTAGATGGGCTTCGAGTTGGGCCCGTTGGCTGGATCACTAACGTGTGTGCGCACTATGGGTTTTCAGCTTTGACCACCGTTCTCGCCGTTAACTACTTCGACAGGTTCGTCACGAGCCTCACGTTTCAAAGGGATAAGCCATGGATGACTCAGTTAACGGCGGTTGCGTGCTTGTCAATCGCTGCAAAGATGGAAGAGACACATGTGCCCCTCCTCTTAGACCTCCAAGTGGAAGAATCGAGGTTTGTGTTTGAAGCAAAGACAATACAAAGAATGGAGCTTCTTGTGTTGTCTACTCTCAAATGGAAGATGCATCCGGTGACCCCAATTTCTTTTTTTGAACACATTGTAAGAAGGCTTGGCCTCAAGAGTCGCTTGCATTGGGAATTTCTATGGCGGTGCCAGCGGGTTCTTCTTGGCGTCATTGCCGATTCAAGGGTTATGAGTTATCTTCCATCTACATTGGCTGCTGCTACGATGATCCATGTTATTAAAGAGATTGAGCCATTTAATGCAACTAAGTACATTAGTGAACTTCTGGGACTACTCAAGATTAGTGAGGAACAAGGGAACCAGTGCTACAAACTCTTGCTGAAATCATTAGTTTGTGAAGAAGGTATTACTGACGGTCTTCACCAGATGCACAAGCGCAAGCGCAAGCGCGAATCTGCCCCGAGTAGCCCAGGAGGTGTCATTGATGCTTCTTTCAGTTGTGATAGCTCAAACGATTTGTGGGCCGTTGCGGCATCGTCGGTTTCACATTCGATGGAGCCGCTGTTTAAGAGGAGCAGAGCTAAGGACCAGCAGATGAGACTGCCTTCTGTTAGTCGCGTGTCTATCGATGTTCTTAATAGCCCTCATTAA 1140 0.4947 MSPTTPSLLDTLLCQEEHDDTFDDTQNDASFHLNDNHHDESPSFCPAKLQSFPHPVLHDNDLFWEHDELASLISKEEETHAAAGNDDDHRGLLDGLRVGPVGWITNVCAHYGFSALTTVLAVNYFDRFVTSLTFQRDKPWMTQLTAVACLSIAAKMEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWKMHPVTPISFFEHIVRRLGLKSRLHWEFLWRCQRVLLGVIADSRVMSYLPSTLAAATMIHVIKEIEPFNATKYISELLGLLKISEEQGNQCYKLLLKSLVCEEGITDGLHQMHKRKRKRESAPSSPGGVIDASFSCDSSNDLWAVAASSVSHSMEPLFKRSRAKDQQMRLPSVSRVSIDVLNSPH 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01024 379 PANTHER CYCLIN-D3-2 39 363 - -
Adu01g01024 379 SUPERFAMILY Cyclin-like 63 197 IPR036915 -
Adu01g01024 379 Pfam Cyclin, N-terminal domain 72 196 IPR006671 -
Adu01g01024 379 PANTHER CYCLINS 39 363 IPR039361 -
Adu01g01024 379 Gene3D - 198 287 - -
Adu01g01024 379 CDD CYCLIN 96 189 IPR013763 -
Adu01g01024 379 SMART cyclin_7 102 190 IPR013763 -
Adu01g01024 379 Pfam Cyclin, C-terminal domain 199 297 IPR004367 -
Adu01g01024 379 Gene3D - 95 197 - -
Adu01g01024 379 SMART Cyclin_C_2 199 321 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01024 Adu-Chr1 15536340 15538536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01024 61 369 Core Cell Cycle Gene Families AT5G67260 50.955 3.79e-101 303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00636 05 7195143 7197012 Adu01g01024 01 15536340 15538536 ECH
Adu08g01021 08 18365159 18366693 Adu01g01024 01 15536340 15538536 ECH
Adu06g03152 06 109741558 109743846 Adu01g01024 01 15536340 15538536 ECH
Adu01g01024 01 15536340 15538536 Adu01g01024 01 15536340 15538536 ECH
Adu01g01024 01 15536340 15538536 Adu05g00636 05 7195143 7197012 PCT