Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01018 ATGGCTTCAACGATGGCTTTTATGTCCTCCATTATTCTCTTTCATCTCTTGACAATCTCATCAGCCATCACCACCAACCAGCAGCCACAACAAGCGAACACGATGAGAACCGACGATGAAGTCATGACCATGTACGAGGAATGGTTGGTGAAGCACCAAAAGGTGTACAATGGATTGGGAGAGAAAGACAAGAGGTTCCAAGTTTTTAAGGATAACTTGGGTTTCATTGATGAACACAACACACACAAAAACACAACATACAAACTTGGGTTGAATAGGTTCGCTGATTTGACGAATGAAGAGTACAGAGCAATGTATTTGGGGACAAAGAGTGATCCCAACCGCAGGATCATCAAGGCCAAGATCAGCGCCGGCAACCGTTACGCTTATAGCGCACGTGACCGGTTGCCGCTGCACGTGGATTGGAGGTCCAAAGGTGCACTTGCACCCGTCAAGGATCAGGGAAGCTGTGGAAGTTGTTGGGCATTCTCAACAATAGCTGCAGTGGAATCCATAAATAAGATAGTAACAGGGAAGCTTGTGAGTTTGTCAGAACAAGAACTTGTTGACTGTGACAAAGCATTCAACGAAGGCTGCAATGGTGGTCTCATGGACTATGCCTTCCAATTCATCATTGCAAACGGTGGCATAGACACCGAGCAACACTATCCATACAAGGGCATCGATGGCACATGTGATCCAACTAGAAAGAATGCTAAGGTAGTGAGCATCGATGGGTACGAGGATGTTCCGGTGAATGATGAGAAGGCTTTGAAGAAAGCTGTTGCTCATCAGCCTGTCAGCGTTGCTATTGAAGCCTCTGGCAGGGCCTTGCAACTCTACGACTCAGGTGTGTTTACGGGTAGATGTGGAACAAGTTTAGATCATGGTGTGGTTGTAGTTGGGTATGGAACCGAAAATGGTGTAGACTATTGGCTTGTGAGGAACTCATGGGGCAAGAATTGGGGCGAGGATGGTTACTTCAAGTTGCAGCGTAACGTCAGAGGCACCAATACTGGCAAATGTGGAATCGCCATGGAAGCCTCATACCCGGTAAAGAATGGCGCAAACGCCGCTTCGGAGAGAACTGGAGGGAGTGTTAGCAGCGCTTGA 1113 0.4753 MASTMAFMSSIILFHLLTISSAITTNQQPQQANTMRTDDEVMTMYEEWLVKHQKVYNGLGEKDKRFQVFKDNLGFIDEHNTHKNTTYKLGLNRFADLTNEEYRAMYLGTKSDPNRRIIKAKISAGNRYAYSARDRLPLHVDWRSKGALAPVKDQGSCGSCWAFSTIAAVESINKIVTGKLVSLSEQELVDCDKAFNEGCNGGLMDYAFQFIIANGGIDTEQHYPYKGIDGTCDPTRKNAKVVSIDGYEDVPVNDEKALKKAVAHQPVSVAIEASGRALQLYDSGVFTGRCGTSLDHGVVVVGYGTENGVDYWLVRNSWGKNWGEDGYFKLQRNVRGTNTGKCGIAMEASYPVKNGANAASERTGGSVSSA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01018 370 CDD Peptidase_C1A 137 351 IPR039417 -
Adu01g01018 370 PANTHER CYSTEINE PROTEASE 27 359 - -
Adu01g01018 370 PRINTS Papain cysteine protease (C1) family signature 154 169 IPR000668 GO:0006508|GO:0008234
Adu01g01018 370 PRINTS Papain cysteine protease (C1) family signature 296 306 IPR000668 GO:0006508|GO:0008234
Adu01g01018 370 PRINTS Papain cysteine protease (C1) family signature 311 317 IPR000668 GO:0006508|GO:0008234
Adu01g01018 370 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 311 330 IPR025661 -
Adu01g01018 370 SUPERFAMILY Cysteine proteinases 37 352 IPR038765 -
Adu01g01018 370 SMART pept_c1 136 352 IPR000668 GO:0006508|GO:0008234
Adu01g01018 370 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 294 304 IPR025660 -
Adu01g01018 370 Pfam Papain family cysteine protease 136 352 IPR000668 GO:0006508|GO:0008234
Adu01g01018 370 Gene3D Cysteine proteinases 17 354 - -
Adu01g01018 370 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 154 165 IPR000169 -
Adu01g01018 370 Pfam Cathepsin propeptide inhibitor domain (I29) 45 102 IPR013201 -
Adu01g01018 370 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 27 359 - -
Adu01g01018 370 SMART Inhibitor_I29_2 45 102 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01018 Adu-Chr1 15374982 15378284 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03158 06 109793829 109798046 Adu01g01018 01 15374982 15378284 ECH
Adu01g01018 01 15374982 15378284 Adu01g01018 01 15374982 15378284 ECH