Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00239 ATGTCGTTTGCAGAATCAAGTCCAGTTATGTCTATGGATGATGTCATGGCTGCTACTAATGAATTTGCTAGGGGATTCAACCACAGTTACTACCTACCCCTTCACATGGCAATTCTAAAAGGAGATTGGGAATCTGCAAAGTCATTCCTTGATGCTGATCCAAGTGCATGGACATCAAAGATCACCACACTGGCCAGAACACCGTTGCACGTTGCCGCCGTAGGAGCTCAGTGGAAGATACTTGAGAAGTTAGTGCATCATGTGCCTTCAGAATTACTAGCTGAATTGGACTCCATGGGTTTCACTTGCCTTCACTATGTTGCAATGGGAGAAAGCATTGATGCTGCAAAGGCATTGTTGGCTAAGAATCATTCTTTGACGCAGATAACTGATTTTAAAGGGTTTACACCACTTTTGTATAGTGTTACCTCTACCAGATGTAAAGAGATGGCATGGTACCTTGCAATGAATACTGTAGATGAAAGACCTGGTTTTCCGTTTTCTAGTGAGTCGTCTCGTCAACTTGTTGCATTGCTTACTGCTGCAGGATTTCATGATATCACCATGTATCTTCTTCAGCGCTACCCCAACTTGGCGACTATTTCAGATTCAAATGGAAGCATTATACTTAATGTTTTGTCAAAGAAAACTTCTGATTTCCAAAGTGGAAATAAGTTTGGGATTTTGCAcagatgcatttaccattGTGTTCCAGCTCAACTTGATCATTTACCACATGGTGATTTAAGAGATTCTTATGACCAATCAAGCCATCATCAATCATATTTTGGAAGCAAAATATGGAATGCAATTCAAACTTCTGCTCCTAGCATAAAGCATTTAAGAGATGTAAAGCTGAGACAAGTGTTTTCTGAGAGATTGGTAGAACATGTTTGCTCTCAAGCTTCAACCATGAGCAACACTCAATTTTGGGAGTCTTTTGTGAGCATGGACATTATCTACAATGCCACATCGTCTGGCATAGTTGAGATTTTAAGGATATGTTTCCAGTTTTTTCCGGATTTGGTTTGGACTCGCATTCCAAATGAAGGATATATAGCTCAAATCGCCATTAAATATAGACAAGAGAAGGTTTTTGGTTTCATATGCAAGATGCCAATAATTTCCAAGATTTTAATCTTAGCATTAGACGAATCACACAACACAACATCACATCTAGCAGCAAGATCTGCTCATTCTCAACTGTTATCAGTTTCTGGTGCAGCATTTAAAATGCAGAAGGAGTTACAATGGTTCAAGAAAGTTGAGCAATTGGATCACCCTATTCACAAGGAAATTAAGAACCAAGATGGAAAAACAGCATGGCAACTATTCAAGGAAGAACACAAGAATTTGCTAGAAGAAAGTGAGAAATGGATGAAAGATACAGCGAACTCCTGTAGCATTGTGGCAGCTCTTATTGTTACGACCGTTTTCGCCGCAGTTCTCACAGTACCTGGAGGTAACAACCAGGAAAAAGGATTTCCAATATTCTTGCCAGATAACACATTCCTAGTGTTTGCTGCATCGGTTGCATTGGCTTTGTTTTCTTCCATGGCTTCTCTTCTGATGTTCTTGTCAATCCTAACAGCACGCTACGCTGAAAAAGATTTTCTCAAGGCGTTACCTCGGAGATTAATATGGGGTCTTGCTTTGTTGTTCTTTGCCATTGTTACTACCATGGTAGCATTTGCTGCTGCGCTTTCTTTGGTTCTTCGCAATAGACTAAAATGGGTGTGGATACCAATAGCTATTATGGCTTGTGTCCCAATTGCTCTATTTGCAAAGCTTCAAATTCCCTTGTTCGGAGGAATGATCATATCAACTTATAGATCTAGCATTTATCATCCTTAA 1854 0.3954 MSFAESSPVMSMDDVMAATNEFARGFNHSYYLPLHMAILKGDWESAKSFLDADPSAWTSKITTLARTPLHVAAVGAQWKILEKLVHHVPSELLAELDSMGFTCLHYVAMGESIDAAKALLAKNHSLTQITDFKGFTPLLYSVTSTRCKEMAWYLAMNTVDERPGFPFSSESSRQLVALLTAAGFHDITMYLLQRYPNLATISDSNGSIILNVLSKKTSDFQSGNKFGILHRCIYHCVPAQLDHLPHGDLRDSYDQSSHHQSYFGSKIWNAIQTSAPSIKHLRDVKLRQVFSERLVEHVCSQASTMSNTQFWESFVSMDIIYNATSSGIVEILRICFQFFPDLVWTRIPNEGYIAQIAIKYRQEKVFGFICKMPIISKILILALDESHNTTSHLAARSAHSQLLSVSGAAFKMQKELQWFKKVEQLDHPIHKEIKNQDGKTAWQLFKEEHKNLLEESEKWMKDTANSCSIVAALIVTTVFAAVLTVPGGNNQEKGFPIFLPDNTFLVFAASVALALFSSMASLLMFLSILTARYAEKDFLKALPRRLIWGLALLFFAIVTTMVAFAAALSLVLRNRLKWVWIPIAIMACVPIALFAKLQIPLFGGMIISTYRSSIYHP 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00239 617 SUPERFAMILY Ankyrin repeat 33 213 IPR036770 -
Adu01g00239 617 SMART ANK_2a 64 94 IPR002110 GO:0005515
Adu01g00239 617 SMART ANK_2a 99 128 IPR002110 GO:0005515
Adu01g00239 617 SMART ANK_2a 29 60 IPR002110 GO:0005515
Adu01g00239 617 PANTHER CASKIN 1 609 - -
Adu01g00239 617 Pfam Domain of unknown function 457 570 IPR026961 -
Adu01g00239 617 Gene3D - 14 243 IPR036770 -
Adu01g00239 617 PANTHER ANKYRIN REPEAT PROTEIN 1 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00239 Adu-Chr1 3097293 3100602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00239 323 592 Miscellaneous Gene Families AT3G12360 24.684 7.72e-12 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00239 01 3097293 3100602 Adu01g00239 01 3097293 3100602 ECH