Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00294 ATGATCCAGGAACTGTTGAGCGGTGCTGGTCTCATTTCAGGCGAAAGCAAAATCTCCAATAATGCCCCAGCCGGAGTTTTAGCACCTCTCATCACTACACCTCATAGTTCTTTTCCTTCTTCTTCTTCATCATCTCACCCTTCCTCCACCACCACCACCACTACTGCCGCCAACGCCACAGCTGCAAATTCCGAGAACCAGAATCTGAGGTGCCCGCGGTGTGATTCTTCCAACACAAAGTTCTGTTACTACAACAACTACAACCTCACTCAGCCTCGCCACTTCTGCAAGACGTGTCGCCGGTACTGGACCAAAGGTGGTGCTCTCAGGAATGTTCCGATCGGTGGTGGCTGCCGGAAGAACAGGAACCTCGGCGCCGCTTCCAACTCCGCCGTGAAGACAAGCGTGGCTAAGATGAAAACAGCTGCCCCGTCAGAGCTTGAGAGGTCAGTGCTCGGCGTGGCCGCTGGGATCATCGACCACCACGACCTTTCTCCAAACCCAATCCTATGGGGATCGCCGCAAAGTAGTCCTCACGTGTTAGCTCTGCTGAGAACTGGTCAAAACCATAACCATAACCCTAACCCTAACCCTAGTGTTCCCATATCCGTCAATGCTGTTAATAAGGAAGAAGGGAATAACTTGATGGGGTCCCACACAGTGACTGAGCCAGTGGTTGGAAATGGGTTGGTTCATGGTCGAGCCCTAAACTTTGATTTTGTTGGTCAATTTCCAACACTTGGGCTATGCAACTCTATCTGGAGAAGCAGTAATAGTGGTAATAACAATAATAATAATAATCAAGATGGGTTTGTAGTTGGAGAACATGGAATTCAAGAACTGTACCAGAGGCTGAGATCATCATCGTCACAAGCAGCTAATTATTGTAGCGACAATAATAACTCGTCACAGGTGTTAGGGAACATGGCTTCTTCTTCATCACATGCATCTTCTTCTTTATCAGCTAATTTGGGGTCAGGTTCAGTGGTTTCTGGGGATGATCAATTGGGGTACACCTGGAATCCAACACCTTCGTGGTTTGATCTTTCCACCACCAATAATGGTACTTTATATCCTTAA 1080 0.4796 MIQELLSGAGLISGESKISNNAPAGVLAPLITTPHSSFPSSSSSSHPSSTTTTTTAANATAANSENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRNLGAASNSAVKTSVAKMKTAAPSELERSVLGVAAGIIDHHDLSPNPILWGSPQSSPHVLALLRTGQNHNHNPNPNPSVPISVNAVNKEEGNNLMGSHTVTEPVVGNGLVHGRALNFDFVGQFPTLGLCNSIWRSSNSGNNNNNNNQDGFVVGEHGIQELYQRLRSSSSQAANYCSDNNNSSQVLGNMASSSSHASSSLSANLGSGSVVSGDDQLGYTWNPTPSWFDLSTTNNGTLYP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00294 359 Pfam Dof domain, zinc finger 67 123 IPR003851 GO:0003677|GO:0006355
Accr9g00294 359 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 56 295 IPR045174 GO:0003700|GO:0006355
Accr9g00294 359 ProSiteProfiles Zinc finger Dof-type profile. 69 123 IPR003851 GO:0003677|GO:0006355
Accr9g00294 359 MobiDBLite consensus disorder prediction 35 62 - -
Accr9g00294 359 ProSitePatterns Zinc finger Dof-type signature. 71 107 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00294 Accr-Chr9 3303307 3304386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00294 41 178 C2C2-Dof Transcription Factor Family AT1G51700 44.755 1.09e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr9g00294 zf-Dof 7.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00294 - - qsu:112033100 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00294 9 3303307 3304386 Accr9g00294 9 3303307 3304386 ECH