Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00310 ATGGAAAGGAATTTTATAGAAGGAAGCAACAACAATAATAATAACAATTCAGGCACAAAAGAAGTAGTAGGGTTAGGAGGAGAGAAGAAGGGAAGGCCACAAGAACAACTGAACTGTCCAAGGTGCAATTCAACAAACACAAAGTTCTGCTACTACAACAACTATAGCCTCACACAACCCAGATATTTCTGCAAGACTTGCAGAAGGTACTGGACTGAAGGTGGGTCCCTCAGGAATGTCCCTGTTGGTGGAGGTTCCAGAAAGAACAAGAAGCTCTTCACTAATAATCCTAATTCATCTTCATCAACAAAGGTTCTTCCTGACTTGAATCCATCAACAACAAGTACTTCTTCTTCTCAGAACCCTAAATTGTTAATGCAAGGAGGCCAAGATCTTAATCTGGCTTTCCCGCCTATTAATGTGGACAATTATCATCATGGGCTTACTTATCAAAGCTCTTCTTCTTCTACTTCTGCTTTGGCGCTTCTAAGAGCAGGCATGAATAATAATAATAATCAGGCTTTTGTTCATAATCCGATACTGATGATGCCAAACTCAAATAACAACAACAATAATAATGCGCTTTTCCCAGCTTCCGGTGGGTTTATAAGCCCCATTATGCATGAGGTTAAGCCAGGAAGCCTTGGATTTCCAGTAGCCGATAATCATCAAGGGCTTCGAGGAGGAAGCAGATATGGTAGTGTTCATCATCATCAAGAGAATAGTGATGATAATAATATTAACGCTGGTGGAGCAAGGTTGTTGTTTCCTTTTGGAGATGTGAAGCAGATTCCGGAAGAAAATAAAGAACATGCAGCTGGGAATAATTCATCCTCTTCTGGGTATTGGACTGGTATGATTGGTGAAGGATCCTGGTAA 879 0.4061 MERNFIEGSNNNNNNNSGTKEVVGLGGEKKGRPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKLFTNNPNSSSSTKVLPDLNPSTTSTSSSQNPKLLMQGGQDLNLAFPPINVDNYHHGLTYQSSSSSTSALALLRAGMNNNNNQAFVHNPILMMPNSNNNNNNNALFPASGGFISPIMHEVKPGSLGFPVADNHQGLRGGSRYGSVHHHQENSDDNNINAGGARLLFPFGDVKQIPEENKEHAAGNNSSSSGYWTGMIGEGSW 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00310 292 MobiDBLite consensus disorder prediction 1 21 - -
Accr7g00310 292 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 22 184 IPR045174 GO:0003700|GO:0006355
Accr7g00310 292 MobiDBLite consensus disorder prediction 81 122 - -
Accr7g00310 292 MobiDBLite consensus disorder prediction 1 38 - -
Accr7g00310 292 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Accr7g00310 292 Pfam Dof domain, zinc finger 35 91 IPR003851 GO:0003677|GO:0006355
Accr7g00310 292 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Accr7g00310 292 MobiDBLite consensus disorder prediction 89 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00310 Accr-Chr7 4164363 4165241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00310 29 292 C2C2-Dof Transcription Factor Family AT3G61850 45.105 7.01e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr7g00310 zf-Dof 2.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00310 - - aip:107623806 239.965