Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00136 ATGGATGGACTACCTAATAATCAAAACTCAGTGACAAAGCCACCAGTAATGGAGGAGAAGAAGGCAAGGCCACAAGAACAATTGAACTGTCCAAGGTGCAATTCAACCAACACCAAGTTCTGCTACTACAACAACTATAGCCTCACACAGCCCAGATACTTCTGCAAGACTTGTAGAAGGTATTGGACAGAAGGTGGGTCCCTCAGAAACATCCCAGTTGGAGGAGGTTCTAGAAAGAACAAGAACAAGATCATCACTTCCTTCTCAGCTTCCTCTTCTTCTTCATCATCATCAACCTCATCATCTTCAAAGCTTCCTGATCTAAATCCACCATTACTACCAAGTCTCTCAGGGTTTAAAGATCCAAGTTTGAATCTTTCTAGAAGCTTCCCAATTTCCAACCAGCAAAACCCTAAGATCCATGGAGGCCAAGATCTTAATCTGGCCTTTCCAACTTCTTCTTCTTCTCTTTCAGCTCCTAGGGTTTTGAATAGTAATAATAATATTCCTTATGTTCCTTCATTCATGATGATGCCAAATACCTCGTATGGTGGTAACCTTAATAATTACCCATCTGGGTTGATTCCCATGCATGAGGAAACTAAACCTAGCCATAATAATATGGGATTTTCTGTGGATGGGCTCGGAAACAGATCGTACGGTGTACAAGAGAATGATCATAACAATGGAGGGAGGCTTTTGCTTCCATTTGGAGGAGTCAAGCAGATTCCAGGTGGTGGTGATGAAGTAGTGGTACAAAATAATAAAGAACAAGGGAATTCAAGTGGGTTTTGGACTGGAATGATTGGTGAAGGATCATGGTAA 825 0.4158 MDGLPNNQNSVTKPPVMEEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKNKIITSFSASSSSSSSSTSSSSKLPDLNPPLLPSLSGFKDPSLNLSRSFPISNQQNPKIHGGQDLNLAFPTSSSSLSAPRVLNSNNNIPYVPSFMMMPNTSYGGNLNNYPSGLIPMHEETKPSHNNMGFSVDGLGNRSYGVQENDHNNGGRLLLPFGGVKQIPGGGDEVVVQNNKEQGNSSGFWTGMIGEGSW 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00136 274 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
Accr6g00136 274 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 188 IPR045174 GO:0003700|GO:0006355
Accr6g00136 274 MobiDBLite consensus disorder prediction 88 116 - -
Accr6g00136 274 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
Accr6g00136 274 MobiDBLite consensus disorder prediction 1 29 - -
Accr6g00136 274 Pfam Dof domain, zinc finger 26 82 IPR003851 GO:0003677|GO:0006355
Accr6g00136 274 MobiDBLite consensus disorder prediction 88 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00136 Accr-Chr6 2233865 2234689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00136 16 274 C2C2-Dof Transcription Factor Family AT3G61850 41.812 2.50e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr6g00136 zf-Dof 6.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00136 - - gmx:778110 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00136 6 2233865 2234689 Accr6g00136 6 2233865 2234689 ECH