Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02090 ATGGAGAGTAGTGAGTGGAAGCCTCAAGTAGAGATATCACCCAATTGTCCCAGGTGTGGGTCTTGTAACACCAAGTTCTGCTACTACAATAACTATAGTTTAACTCAACCTCGCTACTTCTGCAAGGGATGCAGAAGGTACTGGACCAAAGGAGGATCACTCCGAAATGTCCCCGTTGGTGGCGGCTGCCGGAAGAACAGACGTGGCAGTAAGACTTCCTTCAGACAATCATCCATGGATGCTCTTCCTTCCAAGATTTCAACTCACGGAGATAATTGTAATAATCCCGCAACAAATCCACCTTCATGTAGCTCATCAGGTGTGTCAGATGCTCCAAATATTGATCTTGCACTTGTTTATGCGAATTTCCTCAATCAAAAGCCAGATCCAAGAGCACCAAGCGCAGACGTCATTGTTGGTTTGCCATCAGAAGATCATGATCATGTTGGTTTAAGTGGGTGTTTGGCAGAATCAAAACTGAGCGAGAGTGATCAAATGCACCTGTATGGATTCAACTCTATGCCAAAAAATCAGGAAGATCATGGGTTTGATCAGCGTTGTAGTAGTAGTAGTGGGAGTCAAGAAGCTATGAATTTTGAGTTGCCTCCACTGCCAGGTGAAGAGGCGACCTTGCATGATGATATGATGTGGTCCAATAATTCAGGCTTGCTCTCCTCGCAGTTCCCTCTTTTTGGTGCTGATGATGCAGACTTCTTGTTGGATAATTGGAGCAACTTCCATTTATCCAGGCCTTGA 756 0.4497 MESSEWKPQVEISPNCPRCGSCNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGSKTSFRQSSMDALPSKISTHGDNCNNPATNPPSCSSSGVSDAPNIDLALVYANFLNQKPDPRAPSADVIVGLPSEDHDHVGLSGCLAESKLSESDQMHLYGFNSMPKNQEDHGFDQRCSSSSGSQEAMNFELPPLPGEEATLHDDMMWSNNSGLLSSQFPLFGADDADFLLDNWSNFHLSRP 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02090 251 ProSitePatterns Zinc finger Dof-type signature. 16 52 IPR003851 GO:0003677|GO:0006355
Accr5g02090 251 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 6 37 IPR017896 -
Accr5g02090 251 Pfam Dof domain, zinc finger 15 68 IPR003851 GO:0003677|GO:0006355
Accr5g02090 251 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 7 188 IPR045174 GO:0003700|GO:0006355
Accr5g02090 251 MobiDBLite consensus disorder prediction 86 106 - -
Accr5g02090 251 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02090 Accr-Chr5 47210189 47210944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02090 6 219 C2C2-Dof Transcription Factor Family AT3G52440 42.466 4.44e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr5g02090 zf-Dof 2.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02090 - - pcin:129306581 372.474