Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00922 ATGGGTTTGAGTTCTAAGAAGGTTTCTAGTAGTGGGATTGGTTGGAACCAGAACTTGCTGCAAGATCAGAAGTTGGAGCTTCCAAAACCTCCATTGATGAGGAAACAGCAGCAACAGATTCAGTCATCTTCATCATCATTATCATCGGAGCCTTTGAAGTGTCCGAGGTGTGATTCGATCAATACCAAGTTCTGTTACTACAACAACTACAACAAGTCACAGCCTCGCCATTTCTGCAGAACCTGCAAGAGGCACTGGACTAAAGGCGGCACCTTGCGCAATGTCCCCGTCGGCGGCGGCCGGAAAAACAAACGCGTCAAGAAGTCATCATCATCATCCACCCCCATCTCTTCCTCTGCCGCCGCCGCCGCAACCTCCGGCATGCCAATTCAGAGTTCTCTGCAAAGGCCAAGTAATAATAATCTTCCTCCGCCTCCATCATCCTCTGCCTCTCTGTTTCAGTCTCTGATTCCGTCACAACCGTTGACCTTGCTGCTTCCTCCTTCTCATCAGAATCTGATGAACCCTAGAGACTCACAACAACAAAGTAAAGGTTTTGGAATTGGGAATTGTACTGAAAGTTTCTTGACTTCGACTCTGCCTCTTCTTCCTCATCAAAATCAGAGTTTTATCTTCCCTTTCTCATCAAGCTCCTCTGCCTCTTTTGAGACTAACCCATGCTCTGTTTCAAACTCTCTGAGATCCTCAAGTGTTTACAACAACTTCAATAACTACGGCCAAGAGTTGAAGACAATGGAGGAGCCAACCCCAACTCAGACACAGACACAGCCATGGGAGATACCTTCGACAAGCGTAGCAGGCAATACAGAAATGTCAAACTACTGGACTTGGGAGGACCTCGATTCGTTGGTCTCAACTGATCTCAATGTTCCCTGGGATGATTCTGATTTAAAACCCTGA 921 0.4691 MGLSSKKVSSSGIGWNQNLLQDQKLELPKPPLMRKQQQQIQSSSSSLSSEPLKCPRCDSINTKFCYYNNYNKSQPRHFCRTCKRHWTKGGTLRNVPVGGGRKNKRVKKSSSSSTPISSSAAAAATSGMPIQSSLQRPSNNNLPPPPSSSASLFQSLIPSQPLTLLLPPSHQNLMNPRDSQQQSKGFGIGNCTESFLTSTLPLLPHQNQSFIFPFSSSSSASFETNPCSVSNSLRSSSVYNNFNNYGQELKTMEEPTPTQTQTQPWEIPSTSVAGNTEMSNYWTWEDLDSLVSTDLNVPWDDSDLKP 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00922 306 MobiDBLite consensus disorder prediction 34 52 - -
Accr5g00922 306 ProSiteProfiles Zinc finger Dof-type profile. 52 106 IPR003851 GO:0003677|GO:0006355
Accr5g00922 306 ProSitePatterns Zinc finger Dof-type signature. 54 90 IPR003851 GO:0003677|GO:0006355
Accr5g00922 306 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 36 251 IPR045174 GO:0003700|GO:0006355
Accr5g00922 306 MobiDBLite consensus disorder prediction 24 52 - -
Accr5g00922 306 MobiDBLite consensus disorder prediction 109 138 - -
Accr5g00922 306 MobiDBLite consensus disorder prediction 167 186 - -
Accr5g00922 306 MobiDBLite consensus disorder prediction 90 153 - -
Accr5g00922 306 Pfam Dof domain, zinc finger 51 104 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00922 Accr-Chr5 34526307 34527227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00922 33 126 C2C2-Dof Transcription Factor Family AT5G60850 57.447 9.29e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr5g00922 zf-Dof 2.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00922 - - gmx:778119 254.218