Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00503 ATGGAATTCGAGGAGCAAGATCAGGAGCACGAAGAGGCAGAGGAAGAAACGGGGATTCCCGTGCCCCCGATGAGTTACGACTCACCCCGCTCCAAACTCGAGGGACGTGTGTCCGGCCCGACTGGTGGCAGGAAAGGCGGTCCGACGGGAACAGTCAGATACAGAGAGTGTCAAAAGAATCACGCCGTCAGCATCGGCGGCCACGCCGTTGATGGTTGCGGTGAGTTTCTGGCGGCGGGAGAGGAAGGCACCCTCGATGCTCTCAAATGCGCCGCCTGCAACTGTCACCGCAACTTCCACCGCAAGGAGATCGAGGGAGAAACTAGCTCCTTTCACCTGCCGCAGCCGCACCACCCCCAGTACCACCATCAATTTCCCCCTTACTACCACGGCCCGCCGCCGCCGCCGGGAGCAGGGTACCTCCACCATCATCTGGCAAATCCAGCGATGGCACATCACCGGCCTTTGCCTCTTCCAGCCGCGGCATCCGGCGGGGGACTGAGTAGAGAAGAGGAAGACATGTCCAATCCGAGCAGCAGTGGAGGCGGAGGTTTCGGCGGCGGAGGGAGCCGGAGCGAAAGGAAGAAACGGTTTAGGACGAAGTTCACGCCGGAGCAGAAGGAGAAGATGCTGGCATTTTCGGAAAAGGTTGGGTGGAGAATCCAGAAGCATGACGAACCGGCGGTGGAGCAATTCTGCGCGGAGACTGGCGTCAAGAGACAGGTACTCAAGGTTTGGATGCATAATAACAAAAACACTCTCGTTGTATTTTGGGTCGATTCGGATGATGATATTGATTTCTGA 804 0.5784 MEFEEQDQEHEEAEEETGIPVPPMSYDSPRSKLEGRVSGPTGGRKGGPTGTVRYRECQKNHAVSIGGHAVDGCGEFLAAGEEGTLDALKCAACNCHRNFHRKEIEGETSSFHLPQPHHPQYHHQFPPYYHGPPPPPGAGYLHHHLANPAMAHHRPLPLPAAASGGGLSREEEDMSNPSSSGGGGFGGGGSRSERKKRFRTKFTPEQKEKMLAFSEKVGWRIQKHDEPAVEQFCAETGVKRQVLKVWMHNNKNTLVVFWVDSDDDIDF 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00503 267 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 54 103 IPR006456 -
Accr4g00503 267 Pfam ZF-HD protein dimerisation region 52 104 IPR006456 -
Accr4g00503 267 Gene3D - 184 255 - -
Accr4g00503 267 NCBIfam homeobox domain, ZF-HD class 195 252 IPR006455 -
Accr4g00503 267 SUPERFAMILY Homeodomain-like 181 253 IPR009057 -
Accr4g00503 267 MobiDBLite consensus disorder prediction 109 201 - -
Accr4g00503 267 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 53 104 IPR006456 -
Accr4g00503 267 MobiDBLite consensus disorder prediction 1 51 - -
Accr4g00503 267 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 32 254 - -
Accr4g00503 267 FunFam Zinc-finger homeodomain protein 2 188 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00503 Accr-Chr4 4853727 4854706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00503 1 259 ZF-HD Transcription Factor Family AT4G24660 53.462 7.27e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Accr4g00503 ZF-HD_dimer 3.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00503 - - pcin:129294191 368.622