Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00222 ATGGACACAGCTCAGTGGGCACAGGGGATTGGAGTGGTTAAACAGCCCGTGGTGGAAGGTAATTCAATTCCAAAAGCTCCTCCTCCTGGAATGAGCGAAAGGAAGGCAAGGCCACAGAAAGATCAAGCTTTGAACTGCCCAAGGTGCAATTCAACCAACACTAAGTTCTGTTACTACAATAACTATAGCCTCTCTCAGCCAAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACGGCCGGTGGGTCCCTCAGAAATGTTCCCGTCGGAGGAGGTTCCCGGAAGAACAAGCGATCTTCAACAACTTGTTCAAAGAAGCTTCCTGATCTGAACCCCAAGATCCAGCAAGGCCAAGATCTTAACTTAGCATGCCCACCACCAGCACCAGCACCAGCACCCGATCAAGACTATGACAATAGCATATCCAAATTTATGGAGGTTCCTTTTAGTACTCAAGACAAGACTATAACTACAGCGTCTCATCATCATCATGATCAGTTGTCCTCCATGGAGCTTCTGAAAACTGGAATTCCGTCGTCAAGGACTACTTTGTGTTCTTTGATGCCTATGTCAGCGTCGGATTCTTCCGCTTCAGCAATGTATAATTCAAGCGGGTTTCCTAATTTGCAAGATTTGAAACCTCCTCCACCCGGGCTTAGTTTCAGTCTTGAAGGGTTTGCAAATAATGGGTACGGGAGTATTTCTGGGATGCACGATGCAAGTGGTAGTGGCGATGATGGTGCAAGGTTGTTGTTTCCTACTGAGGATTTGAAGCAAGGTGTTGGAAGTAGTACTGATCATTTTGAGCACAATAGAAGCCATGCGGATTCAACAGGGTTTTGGAATGGCATGTTAGGTGGAGGATCCTGGTAA 873 0.4651 MDTAQWAQGIGVVKQPVVEGNSIPKAPPPGMSERKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTAGGSLRNVPVGGGSRKNKRSSTTCSKKLPDLNPKIQQGQDLNLACPPPAPAPAPDQDYDNSISKFMEVPFSTQDKTITTASHHHHDQLSSMELLKTGIPSSRTTLCSLMPMSASDSSASAMYNSSGFPNLQDLKPPPPGLSFSLEGFANNGYGSISGMHDASGSGDDGARLLFPTEDLKQGVGSSTDHFEHNRSHADSTGFWNGMLGGGSW 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00222 290 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 30 190 IPR045174 GO:0003700|GO:0006355
Accr4g00222 290 MobiDBLite consensus disorder prediction 19 39 - -
Accr4g00222 290 ProSiteProfiles Zinc finger Dof-type profile. 44 98 IPR003851 GO:0003677|GO:0006355
Accr4g00222 290 MobiDBLite consensus disorder prediction 93 118 - -
Accr4g00222 290 Pfam Dof domain, zinc finger 41 98 IPR003851 GO:0003677|GO:0006355
Accr4g00222 290 ProSitePatterns Zinc finger Dof-type signature. 46 82 IPR003851 GO:0003677|GO:0006355
Accr4g00222 290 MobiDBLite consensus disorder prediction 85 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00222 Accr-Chr4 2219961 2221287 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00222 31 290 C2C2-Dof Transcription Factor Family AT3G61850 43.885 1.64e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr4g00222 zf-Dof 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00222 - - gmx:778115 318.161