Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00221 ATGGACACAGCTCAGTGGGCACAGGGGATTGGAGTGGTTAAACAGCCCGTGGTGGAAGGTAATTCAATTCCAAAAGCTCCTCCTCCTGGAATGAGCGAAAGGAAGGCAAGGCCACAGAAAGATCAAGCTTTGAACTGCCCAAGAAGGTACTGGACGGCCGGTGGGTCCCTCAGAAATGTTCCCGTCGGAGGAGGTTCCCGGAAGAACAAGCGATCTTCAACAACTTGTTCAAAGAAGCTTCCTGATCTGAACCCCAAGATCCAGCAAGGCCAAGATCTTAACTTAGCATGCCCACCACCAGCACCAGCACCAGCACCCGATCAAGACTATGACAATAGCATATCCAAATTTATGGAGGTTCCTTTTAGTACTCAAGACAAGACTATAACTACAGCGTCTCATCATCATCATGATCAGTTGTCCTCCATGGAGCTTCTGAAAACTGGAATTCCGTCGTCAAGGACTACTTTGTGTTCTTTGATGCCTATGTCAGCGTCGGATTCTTCCGCTTCAGCAATGTATAATTCAAGCGGGTTTCCTAATTTGCAAGATTTGAAACCTCCTCCACCCGGGCTTAGTTTCAGTCTTGAAGGGTTTGCAAATAATGGGTACGGGAGTATTTCTGGGATGCACGATGCAAGTGGTAGTGGCGATGATGGTGCAAGGTTGTTGTTTCCTACTGAGGATTTGAAGCAAGGTGTTGGAAGTAGTACTGATCATTTTGAGCACAATAGAAGCCATGCGGATTCAACAGGGTTTTGGAATGGCATGTTAGGTGGAGGATCCTGGTAA 792 0.4722 MDTAQWAQGIGVVKQPVVEGNSIPKAPPPGMSERKARPQKDQALNCPRRYWTAGGSLRNVPVGGGSRKNKRSSTTCSKKLPDLNPKIQQGQDLNLACPPPAPAPAPDQDYDNSISKFMEVPFSTQDKTITTASHHHHDQLSSMELLKTGIPSSRTTLCSLMPMSASDSSASAMYNSSGFPNLQDLKPPPPGLSFSLEGFANNGYGSISGMHDASGSGDDGARLLFPTEDLKQGVGSSTDHFEHNRSHADSTGFWNGMLGGGSW 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00221 263 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 48 164 IPR045174 GO:0003700|GO:0006355
Accr4g00221 263 MobiDBLite consensus disorder prediction 18 112 - -
Accr4g00221 263 Pfam Dof domain, zinc finger 46 71 IPR003851 GO:0003677|GO:0006355
Accr4g00221 263 MobiDBLite consensus disorder prediction 66 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00221 Accr-Chr4 2219961 2221287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00221 31 263 C2C2-Dof Transcription Factor Family AT3G61850 34.892 1.93e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr4g00221 zf-Dof 8.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00221 - - gmx:778115 240.736