Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01168 ATGGACACAGCTCAGTGGGCACAGGGGAATATTGGAGTGGTTAAAACTATGGAATTAGGTTCATCAAATCCAAAGCCAGCTCCTATGTTGGAGAAAAAGGCAAGGCCACAGAAAGATCAAGCCTTGAACTGTCCAAGGTGCAATTCAACCAACACAAAATTCTGTTACTACAACAACTATAGCCTCTCTCAGCCCCGATACTTCTGTAAGACTTGTAGAAGGTATTGGACTGAAGGTGGCTCTCTCAGGAATGTTCCTGTTGGTGGTGGCTCCAGAAAGAACAAGAGACCTTCTTCTAATTCTTCTTCATCTTCTTCCTCAACATCTTCAAAGAAGCTTCCAGAACCTTCTCCTCTTTCCCAGAACCCGACCACCGGCAACAACAACAACAAGATCCACCAGGCCCAAGATCTTAACTTGGCATACCCAGAACGAGGTGCTGGGATGTTACAACATGAGATTTCTGGAAATTCTAATAATTCTTCGAGGGGTTTGATGAGTTCCTTGATGCCCATGTCGGTTTCATCGGATGGAAGCATGATTTATGAAAATAATAGCAATAATTCAGCTCCTCATCCTCATCATGGTGGGTTTCCTTTGGAGTTCAAGCCTCATCATCATCATCATCAAGGTCTTAATTTCAGCTTCGAGGGGTTTGATAATAATAATGGGTTAATTGGAAGTAGTGGTCTTCATCATCATCATCATCAGGGAATGCAATTGGGTAATTCTTCAGCTATTGGTGGTGCAAGGATCTTGTTTCCCATTGAAGATTTGAAGCAGCACGTGCCAAGCACTACCACTACTAGTCATGAGTTTGATCAGCAAAATAATCGAGCAACAAGCCATGGAGATCCAAGTGGGTTTTGGAATGGCATGTTAGGTGGAGGAGCATGGTAG 900 0.4344 MDTAQWAQGNIGVVKTMELGSSNPKPAPMLEKKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPSSNSSSSSSSTSSKKLPEPSPLSQNPTTGNNNNKIHQAQDLNLAYPERGAGMLQHEISGNSNNSSRGLMSSLMPMSVSSDGSMIYENNSNNSAPHPHHGGFPLEFKPHHHHHQGLNFSFEGFDNNNGLIGSSGLHHHHHQGMQLGNSSAIGGARILFPIEDLKQHVPSTTTTSHEFDQQNNRATSHGDPSGFWNGMLGGGAW 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01168 299 MobiDBLite consensus disorder prediction 264 285 - -
Accr3g01168 299 Pfam Dof domain, zinc finger 39 96 IPR003851 GO:0003677|GO:0006355
Accr3g01168 299 ProSiteProfiles Zinc finger Dof-type profile. 42 96 IPR003851 GO:0003677|GO:0006355
Accr3g01168 299 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 31 205 IPR045174 GO:0003700|GO:0006355
Accr3g01168 299 MobiDBLite consensus disorder prediction 18 40 - -
Accr3g01168 299 MobiDBLite consensus disorder prediction 264 299 - -
Accr3g01168 299 MobiDBLite consensus disorder prediction 151 170 - -
Accr3g01168 299 ProSitePatterns Zinc finger Dof-type signature. 44 80 IPR003851 GO:0003677|GO:0006355
Accr3g01168 299 MobiDBLite consensus disorder prediction 81 131 - -
Accr3g01168 299 MobiDBLite consensus disorder prediction 152 170 - -
Accr3g01168 299 MobiDBLite consensus disorder prediction 93 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01168 Accr-Chr3 13131057 13132630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01168 1 299 C2C2-Dof Transcription Factor Family AT4G24060 40.580 1.05e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr3g01168 zf-Dof 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01168 - - pcin:129300981 412.92