Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01083 ATGTTGGGTAGTTGTGAATTCTCGGCTGCGTCGTCTGATGCTAAGCCATTCCCCAGGTGGAAGCCCCACCACGTGGAGCCTTCTCCTCCTCCTTGCCCTCGTTGTTCTTCTTCCAACACCAAATTCTGTTACTACAACAACTACAGCTTGTCCCAGCCCAGGTACTTGTGTAAATCTTGCCGGCGCTACTGGACCAAAGGCGGCTTCCTCCGCAACGTCCCTGTTCGCGGTGGTTCCCGCAAATCTCGCCGTCCTAAGACCACAAGGCTCCCGCCAAGTCAGCGTGTTTCCACCAACTACGCTCCTACTAACTCCGACACCAACGGGTCCGATATTGACATGGCCGTGGTCTTTGCTAATTACTTGAGCTCTGGTAACGATGTGCCTCAGCCGTCCGATCCGGTGGTAGAGGGAGAAGGCATGGTTTTTCCTCGAGACGAGTCGTCGGTGATGAGTGGAATTGAGTTAGAGTGGGAGAGCTTGTTAGGTGGTGGTGACGGCGGAGAAGTGGTCCAAGATGATGTTTTCTGCTTGTCTGATGCTACGACGTCGTCTTCGTCGTCTGTCATGTGGCAACCACCACCACCTCTGATGCAGTTGCCGGAGGAGTTGGACAATCCCTTGCCTTTCAATTATGATGAAGTTGCTCAATTTCCTATCATCGCCGATTACTCCTGGAATTGGAATTCCTTCGATTTTCCTACTTTGCAGGCCTTCTCATCTTCAAGGCCTCTCGATCCTTAA 744 0.5228 MLGSCEFSAASSDAKPFPRWKPHHVEPSPPPCPRCSSSNTKFCYYNNYSLSQPRYLCKSCRRYWTKGGFLRNVPVRGGSRKSRRPKTTRLPPSQRVSTNYAPTNSDTNGSDIDMAVVFANYLSSGNDVPQPSDPVVEGEGMVFPRDESSVMSGIELEWESLLGGGDGGEVVQDDVFCLSDATTSSSSSVMWQPPPPLMQLPEELDNPLPFNYDEVAQFPIIADYSWNWNSFDFPTLQAFSSSRPLDP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01083 247 MobiDBLite consensus disorder prediction 1 31 - -
Accr3g01083 247 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Accr3g01083 247 MobiDBLite consensus disorder prediction 74 107 - -
Accr3g01083 247 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 27 105 IPR045174 GO:0003700|GO:0006355
Accr3g01083 247 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Accr3g01083 247 MobiDBLite consensus disorder prediction 89 107 - -
Accr3g01083 247 Pfam Dof domain, zinc finger 31 84 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01083 Accr-Chr3 12178548 12179291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01083 30 137 C2C2-Dof Transcription Factor Family AT3G52440 55.556 1.07e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr3g01083 zf-Dof 5.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01083 - - pcin:129303730 270.011