Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00318 ATGCCGCTTCAGAAGCCCATTTTGGGAAGCCCCTTCCTTTTGTTACTTTTACAGGTCTTCATCAAAGTTGCTCTCGTGAGCTCTAAATCTACAATCGAGCCTTGCTCAAACTCCGATTCCTGTAATGCACTTCTCGGCTACACTGTGTACACTGACCTAAAGGTCTCTGAGGTGGCTTCCCTCTTTCAAATCGACCCCATTGCTCTTCTCACAGCCAATGCCATCGACATTTCGTACCCTGACGTAGAGCAGCACATTCTTCCCTCCCAGCTTTTCCTCAAAATCCCCATTAACTGTTCCTGCGTTGACGGAATTCGTAAATCGGTGTCGACCCATTACAGAACTCGGGCCTCTGATACTCTTTCATCGATTGCAGACTCTATATATGGCGGTCTGGTTTCTGCTGACCAGCTTAGGGAGGCAAACTCCATAACCGACCCTTCAGTATTGGATGTGGGTCAGAGCCTTGTGGTGCCTCTTCCATGCACTTGCTTCAATGGGACCGATAACTCTTTGCCTGCAATTTACCTGTCGTACGTGGCGCTGCCCATCGACACTTTGGCTGCGATTGCTGCCAGGTATTCCACCACTCTTACCGATTTGATGGATGTTAACTCCTTGGGGAGTACGGCTATCAGCGATGGCGATATTCTTGCTATTCCTATCCCGGCTTGCGCATCAAATTTTCCAAATTATTCCGCTGATTATGGTTTGCTTGTCCCCAATGGGAGTTATGCGATTACAGCGAGCCACTGTATGCAGTGTAGTTGCGGACCACAAAATCTGAATTTGTACTGTATGCCTGCTTCTCTGGCCGTTTCTTGCTCCAGCATGCAATGTAAAAGCAGCAACCTTATGGTTGGGAATCTTACAGCACAACAAAGTAGTGCTGGCTGCAACGTTACTTCTTGCGATTATGATGGTTTTGTCAATGGCACAATAGCAACAACGTTGTCCACTTCTCTTCAGCCTCGATGTCCAGGGCCACAGAAATTTCCGCCACTTGTTGCGCCACCTACAACTGTTACCAAGATTTCAGACTTTGCACCATCTCCATCACCTCAGTCATATCCAGGTGGTCCAATGAACCCCAAATCATCAGGGTTGCCTTCCACCGGGTCAATTCCTGGATTCACCCCTGCAAATGGGCCAGCCAGTGGCCTGCTGTCTGGTGCTTCTGCTGCAAGCTCCTTGACGAATCCTATGCTCACTTTGACATATGCGCTTGTGTTATTGTTTGGCAAGCTGTTGATCTCTGTAGCATTGTAA 1269 0.4831 MPLQKPILGSPFLLLLLQVFIKVALVSSKSTIEPCSNSDSCNALLGYTVYTDLKVSEVASLFQIDPIALLTANAIDISYPDVEQHILPSQLFLKIPINCSCVDGIRKSVSTHYRTRASDTLSSIADSIYGGLVSADQLREANSITDPSVLDVGQSLVVPLPCTCFNGTDNSLPAIYLSYVALPIDTLAAIAARYSTTLTDLMDVNSLGSTAISDGDILAIPIPACASNFPNYSADYGLLVPNGSYAITASHCMQCSCGPQNLNLYCMPASLAVSCSSMQCKSSNLMVGNLTAQQSSAGCNVTSCDYDGFVNGTIATTLSTSLQPRCPGPQKFPPLVAPPTTVTKISDFAPSPSPQSYPGGPMNPKSSGLPSTGSIPGFTPANGPASGLLSGASAASSLTNPMLTLTYALVLLFGKLLISVAL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00318 422 ProSiteProfiles LysM domain profile. 111 158 IPR018392 -
Accr3g00318 422 MobiDBLite consensus disorder prediction 360 377 - -
Accr3g00318 422 Gene3D LysM domain 105 166 IPR036779 -
Accr3g00318 422 Pfam LysM domain 185 221 IPR018392 -
Accr3g00318 422 Pfam LysM domain 115 159 IPR018392 -
Accr3g00318 422 SUPERFAMILY LysM domain 111 160 IPR036779 -
Accr3g00318 422 SMART LysM_2 178 221 IPR018392 -
Accr3g00318 422 SMART LysM_2 112 159 IPR018392 -
Accr3g00318 422 ProSiteProfiles LysM domain profile. 177 220 IPR018392 -
Accr3g00318 422 SUPERFAMILY LysM domain 177 222 IPR036779 -
Accr3g00318 422 CDD LysM 185 220 IPR018392 -
Accr3g00318 422 Gene3D LysM domain 168 230 IPR036779 -
Accr3g00318 422 CDD LysM 111 158 IPR018392 -
Accr3g00318 422 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 13 330 - -
Accr3g00318 422 MobiDBLite consensus disorder prediction 343 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00318 Accr-Chr3 3456285 3459114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00318 11 396 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 67.775 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00318 - - qsa:O6P43_019748 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00318 3 3456285 3459114 Accr3g00318 3 3456285 3459114 ECH