Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02450 ATGGAGAGAGTGTGGAAGCATAATTCGGAGATATCACCTAATTGTCCGAGGTGTGGCTCTTGCAACACCAAGTTCTGCTATTACAATAACTACAGCTTAACTCAACCTCGCTACTTTTGCAAAGCCTGCAGAAGGTACTGGACCAAAGGAGGATCCCTCCGCAACGTCCCCGTCGGCGGTGGCTGCCGGAAAACCAGGCGCCATGCTAGCAAGACGTTAAGACTACACTCATCAGCCTTGCCTTCTCCACCTAATAATGCTGCTCATTATCATCATGCCCATCACTCAACTGTTTCTTTAGCGGCGTCTGATCACCATGCTCCACATATTGATCTTGCACTCATTTACTCGAATTTTCTCAATCAAAACCCAGATTCAAGTGATCAGGAGCCACATCATCAATTCATGAAAACACTAGGTTTTGATCCTTGCGTAGAGTATCCGAGTCTCTCCGACATAGTTTTTGGTCTTTCTGAACCATCAACAGTAGAATCCCATTTCAATGTTGCTGAGGATCATCGTCATCATTTGGGTGGGTTATTTAACTCCATGCAGGAGCATAAGGAAGACAGATTAATTGGTACCGGCGATTTTGAGCTGCCACCATTACCAGGAGAAGAGTTAGCCCAGCAATATGATATGACGACGTGGTCCGAATCTCATGATGAGATGATGGTCGTAAACCAAGCGCCACTTGGAACTCAACCTCATGTGAATGGTAACTGGGGACACTTTCATTACTCAACCAATGTTTCTTTTCCAGGCCTTTGA 771 0.4553 MERVWKHNSEISPNCPRCGSCNTKFCYYNNYSLTQPRYFCKACRRYWTKGGSLRNVPVGGGCRKTRRHASKTLRLHSSALPSPPNNAAHYHHAHHSTVSLAASDHHAPHIDLALIYSNFLNQNPDSSDQEPHHQFMKTLGFDPCVEYPSLSDIVFGLSEPSTVESHFNVAEDHRHHLGGLFNSMQEHKEDRLIGTGDFELPPLPGEELAQQYDMTTWSESHDEMMVVNQAPLGTQPHVNGNWGHFHYSTNVSFPGL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02450 256 Pfam Dof domain, zinc finger 14 67 IPR003851 GO:0003677|GO:0006355
Accr2g02450 256 ProSitePatterns Zinc finger Dof-type signature. 15 51 IPR003851 GO:0003677|GO:0006355
Accr2g02450 256 ProSiteProfiles Zinc finger Dof-type profile. 13 67 IPR003851 GO:0003677|GO:0006355
Accr2g02450 256 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 10 161 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02450 Accr-Chr2 59949738 59950508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02450 4 236 C2C2-Dof Transcription Factor Family AT3G52440 40.756 5.28e-46 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr2g02450 zf-Dof 1.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02450 - - pcin:129303526 315.464