Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02192 ATGCAAATGCTCTCTGGTGACCCCTTTTCCTTATCCTCTTCCATCGGAGCCTTCGCTCCCGACCCGAATCCAAACCCTAACCCTAAACTCAACCCCCCTCCCCTCCCAAAAAAGAAGAGAAATCTCCCAGGAACACCAGATCCAGATGCCGAGGTCATCGCTCTGTCGCCCAAATCTCTCATGGCCACAAACCGATTCATATGTGAAATATGCAACAAAGGGTTTCAGAGAGACCAGAACCTGCAGCTTCACCGGAGGGGGCACAACCTGCCATGGAAGCTGCGACAAAGGTCGAACAAGGAGGTCAGGAAGAAGGTGTACATATGCCCAGAGAAGACATGCGTGCACCACGACCCGTCCAGAGCACTGGGGGACCTCACAGGGATAAAGAAGCATTATAGCAGAAAACACGGGGAGAAGAAATGGAAGTGCGACAAGTGCTCGAAGAAATACGCAGTCCAGTCCGATTGGAAAGCTCACACCAAAACTTGTGGTACTAGAGAATATAAGTGTGACTGTGGCACCCTTTTCTCTAGGAAGGATAGTTTCATCACCCATAGAGCTTTCTGCGATGCCTTGACAGAAGAGAGCGCGAGGCTCACCTCAGTTGGCACGTCAGATTTGAATTTTAAAAACGAAGAGTGTGTGATGAACTCTAACTCTCAGCTTAGCTCAGCTCATGGATTTGGCATTTCGCAATTCGGTGCAAATGGTTTTCGTTCAGAATTTGATGGAATGGGCATGAGTATGGGTGGTGCTGACCAGCAAATCATGAGGCCAAACTTGTCACTGTGGTTGAACCAGCTGGGAAATTCTGGTCTTTATGTGTCAAATTCGAGTTCTTCAGGTTTGCCCGAGATCAATATGCAAATGCCTCAACCTAATAACACTTTTGCTCCTTCTTCTTTGTCCAGTTATTCCCCCTCAATTGGGAAAAAAGGAGAGAGTAGTGGAAGTGGAAACTTAGTATCTGTTTATAATTCAGAGTCTCGAAGCAACCAATCAAAGCCAGCTTCTCCCATGTCAGCCACTGCACTTCTACAGAAAGCGGCTCAACTGGGTTCAACCAGAAGCAGCAACCCTTCCATATTTAGCGGCAGCTTTGGAGTAATGAGCTCGTCTTCTTCCCAGACAACGGCAAGTCTCGAAAACAACAACGCAGACCAAATCCAAAACCGTAACAACAACGAGCTGAACCAAGTGTATCATCATCAGAGTATGAAGCAATCAGAGAATTTTAGTTCAAGTAGCAGTGGTGTCGGCGGAACGTTGGGGATAAGCAATAACAACAACTTCAGCTCATTGACGCATTCATCGAGCAGTGGTCTTGATGAGCTTGTGTCACAGTCCCATGGAAGACAAAGTAACAACAAACAAGTGCAACTGAAGCTGTATCCTGATTCAAACAATGGAGAACATGGTTACACCAGAGATTTTCTTGGAATGAGCGGACCAGGAGGAGTAGGAGCTGGCTCTCCTTTCCTTCCCCAAGAGCTCGCTAAATTTGCTTCCATTGCCTCATCCATGGGAATGTCTCAGTTCCCGAGTAGTACTACTCAGTAA 1563 0.4709 MQMLSGDPFSLSSSIGAFAPDPNPNPNPKLNPPPLPKKKRNLPGTPDPDAEVIALSPKSLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVRKKVYICPEKTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFSRKDSFITHRAFCDALTEESARLTSVGTSDLNFKNEECVMNSNSQLSSAHGFGISQFGANGFRSEFDGMGMSMGGADQQIMRPNLSLWLNQLGNSGLYVSNSSSSGLPEINMQMPQPNNTFAPSSLSSYSPSIGKKGESSGSGNLVSVYNSESRSNQSKPASPMSATALLQKAAQLGSTRSSNPSIFSGSFGVMSSSSSQTTASLENNNADQIQNRNNNELNQVYHHQSMKQSENFSSSSSGVGGTLGISNNNNFSSLTHSSSSGLDELVSQSHGRQSNNKQVQLKLYPDSNNGEHGYTRDFLGMSGPGGVGAGSPFLPQELAKFASIASSMGMSQFPSSTTQ 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02192 520 Gene3D Classic Zinc Finger 120 199 - -
Accr2g02192 520 MobiDBLite consensus disorder prediction 1 20 - -
Accr2g02192 520 SUPERFAMILY beta-beta-alpha zinc fingers 65 162 IPR036236 -
Accr2g02192 520 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 27 497 IPR031140 -
Accr2g02192 520 FunFam protein indeterminate-domain 12-like 45 113 - -
Accr2g02192 520 MobiDBLite consensus disorder prediction 285 343 - -
Accr2g02192 520 SMART c2h2final6 66 88 IPR013087 -
Accr2g02192 520 SMART c2h2final6 107 137 IPR013087 -
Accr2g02192 520 SMART c2h2final6 142 162 IPR013087 -
Accr2g02192 520 Pfam Zinc-finger double-stranded RNA-binding 66 88 IPR022755 -
Accr2g02192 520 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 88 IPR013087 -
Accr2g02192 520 MobiDBLite consensus disorder prediction 21 41 - -
Accr2g02192 520 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Accr2g02192 520 MobiDBLite consensus disorder prediction 435 459 - -
Accr2g02192 520 MobiDBLite consensus disorder prediction 1 50 - -
Accr2g02192 520 FunFam protein indeterminate-domain 5, chloroplastic-like 120 199 - -
Accr2g02192 520 Gene3D Classic Zinc Finger 45 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02192 Accr-Chr2 56850168 56851950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02192 1 505 IDZ Gene Family AT5G03150 49.634 2.64e-136 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr2g02192 zf-C2H2_jaz 7.6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02192 K25870 - gmx:100801182 538.495