Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01910 ATGGACCTTGCTCGGTTATTCCTGGTAATCATTTCCGGTGTCGCCGCCGCATCATGGGTGGCGGTGGTGGTCGAGGCTCAGCCAGCGGCGACGTTCAAATGCAGCTCGGAAGGTAAAACGTGTCACTCCCTGGTGGATTATTCGTCGCCAAATGAAACCACCTTAGGTCACATTCAAAAGCTCTTCAACCTGAAGCATGTTCTGGACATAGTCGGCGCTAACGCCCTTCCCTCCAACACCACAGCCAACCACACCGTTAAAAGTGGCGAAATAATTAAAATCCCCTTTCAGTGCAAGTGTTCCAACGGCACCGGCTTTTCCAACAAGACGCCTGTCTACACCATCCTGAAAGACGACACGCTTTACCACATAGCCATGGATGTGTTCTCGCGTTTGGTCACTCACCAACAAATCGAAAAGCTCAACAACATACCCGACCCGAAAAAAATCCAGCCCGGCCAGAAGGTGTGGATCCCCCTCCCTTGCAGCTGCGATCAGGTCGACGGCGCCGACGCCGTCCACTATGGTCATCTGGTGGCTAATGGGAGCTCCTTTCAGCAGATTGCTCAACAATACGGCACCACCCAAGATACCCTTCTCGCCCTCAACAACATTTCTGATCCTAAGTCCCTTCAAGCCGGTCAAATCATCGATGTTCCCCTCAAAGCTTGTTCCTCATCGGCGGTGACAAATAGCTCCTTGGACTATCCTCTGCTCGTTGCAAATGGCACCGACACCTACACTGCCAATGGTTGCGTCAAGTGCAGCTGTGACTCCGCCGCCATTAACGCCACATTACTATGCAAGCCATCGCAAGTTAAACCATATAGATGGCATACATGTCCGTCTATGCTATGTGAAAATTCAACCATTGGCAACATCACTTCTACAGCTTCCTGCACTCGTACCATCTGTGGTTACACCGGTTATAGCAATCAAACTATTTTCACCGATCTTGTCAACGAGTCCACTTGTCCTGCACCAACAGGATCACCAGCAGGATCAGGAGCATCCAGGATCAACAGCTTGCAAGGCTGGGGTTGGAATAAACTTTTCATGGCACTTCACTTTATCTTCTTTTGTGTCTGTCTTTTGTAG 1098 0.5027 MDLARLFLVIISGVAAASWVAVVVEAQPAATFKCSSEGKTCHSLVDYSSPNETTLGHIQKLFNLKHVLDIVGANALPSNTTANHTVKSGEIIKIPFQCKCSNGTGFSNKTPVYTILKDDTLYHIAMDVFSRLVTHQQIEKLNNIPDPKKIQPGQKVWIPLPCSCDQVDGADAVHYGHLVANGSSFQQIAQQYGTTQDTLLALNNISDPKSLQAGQIIDVPLKACSSSAVTNSSLDYPLLVANGTDTYTANGCVKCSCDSAAINATLLCKPSQVKPYRWHTCPSMLCENSTIGNITSTASCTRTICGYTGYSNQTIFTDLVNESTCPAPTGSPAGSGASRINSLQGWGWNKLFMALHFIFFCVCLL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01910 365 Gene3D LysM domain 107 165 IPR036779 -
Accr1g01910 365 Pfam LysM domain 178 220 IPR018392 -
Accr1g01910 365 Pfam LysM domain 113 159 IPR018392 -
Accr1g01910 365 Gene3D LysM domain 166 233 IPR036779 -
Accr1g01910 365 ProSiteProfiles LysM domain profile. 111 158 IPR018392 -
Accr1g01910 365 ProSiteProfiles LysM domain profile. 175 219 IPR018392 -
Accr1g01910 365 SUPERFAMILY LysM domain 176 220 IPR036779 -
Accr1g01910 365 SUPERFAMILY LysM domain 112 160 IPR036779 -
Accr1g01910 365 CDD LysM 112 158 IPR018392 -
Accr1g01910 365 CDD LysM 177 219 IPR018392 -
Accr1g01910 365 SMART LysM_2 112 159 IPR018392 -
Accr1g01910 365 SMART LysM_2 176 220 IPR018392 -
Accr1g01910 365 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 6 328 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01910 22 330 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 48.718 8.67e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01910 - - lang:109351135 382.874