Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01154 ATGGTCTTCTCTTCCTTTCCACCCTATCATCTAGATCCACCACCCAACTGGCCTCACCAGCAACTTGATCATCAGCAGCCAGAGGGACTGATTCATGCCCAGGGTTCCCAGGTTCCGCCTCCGCCGCCGCCACTACCGGTTGCTGATGCCGGTGATGGCACCAAAGGCTCGACGAGGCCGGGATCCATGGCTGATCGAGCTCGGCTAGCGAAGATAGCACAGCCAGAAGGGGCACTGAAATGTCCACGGTGCGAATCAACCAACACCAAGTTCTGTTACTACAACAATTACAACCTCTCTCAGCCTCGCCACTTCTGCAAGACTTGCCGGCGATACTGGACCCAAGGTGGCGCGTTGAGGAACGTCCCAGTCGGAGGAGGTTGTAGAAGGAAGAACAAAAGAATCAAAGGAACTAACAGCAGAAAATCATCAAAATCTCCCAACAAAGCAGCATCAACATCAGGTTCTTCCATTATCTCAAACGCCGCATGTGCCAATAATTCCTCAAGTAACTGTTGCCCTAGTAGTGACAATCTTCATCATCACTTGATAGGTCATCACTTATTACCATCTCCACCATTACTTTTCCCTCCTCCTCCTACTACATCTCATACTAGTTACAGTGACTACGACGTCGTTTTTGGGGCAACAAACATCAGAGATGCTGAATTTCAAATTGCTTGTAATAACAATATAATTGGCAATAATAACATCAATGGCTTTATTAGTACTACTGAGCAATGGAAGCTACCAAGTCTCCTGCAGCATCATCAACAGTTTCCTTCAACATTCTTGAGTAATTTGGAGGCTCCACCAGTAGGGTTATATCATCAGTTTGAAAGATCGGAAAATAATGCTGAGATCATCGAACCTTCAACGAAATTGTTATATTCTGGTGGTAGTGGAAATATTGGTAGTGATCATAATCATCATCATCTTCAGCTTACTACTACAGTCAAAATGGAGGAAAATATGGATCAAGTGTTGGGTTTATCCAAAAGTCTTACGGGTAACTCGGAAAATAATAATAATAATGAACAATTTTGGGAAGCAAATAATAATGGCAGTGCATGGAACATCAATAATGTTTCTATTAGTTTCGCTTCTTCTTCTTCTTCGGCCGCCACCCATCTCGTGTGA 1140 0.443 MVFSSFPPYHLDPPPNWPHQQLDHQQPEGLIHAQGSQVPPPPPPLPVADAGDGTKGSTRPGSMADRARLAKIAQPEGALKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTQGGALRNVPVGGGCRRKNKRIKGTNSRKSSKSPNKAASTSGSSIISNAACANNSSSNCCPSSDNLHHHLIGHHLLPSPPLLFPPPPTTSHTSYSDYDVVFGATNIRDAEFQIACNNNIIGNNNINGFISTTEQWKLPSLLQHHQQFPSTFLSNLEAPPVGLYHQFERSENNAEIIEPSTKLLYSGGSGNIGSDHNHHHLQLTTTVKMEENMDQVLGLSKSLTGNSENNNNNEQFWEANNNGSAWNINNVSISFASSSSSAATHLV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01154 379 ProSitePatterns Zinc finger Dof-type signature. 81 117 IPR003851 GO:0003677|GO:0006355
Accr1g01154 379 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 67 295 IPR045174 GO:0003700|GO:0006355
Accr1g01154 379 MobiDBLite consensus disorder prediction 1 63 - -
Accr1g01154 379 MobiDBLite consensus disorder prediction 124 155 - -
Accr1g01154 379 MobiDBLite consensus disorder prediction 141 155 - -
Accr1g01154 379 ProSiteProfiles Zinc finger Dof-type profile. 79 133 IPR003851 GO:0003677|GO:0006355
Accr1g01154 379 Pfam Dof domain, zinc finger 78 133 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01154 Accr-Chr1 33339866 33341240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01154 59 136 C2C2-Dof Transcription Factor Family AT2G37590 82.051 1.08e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr1g01154 zf-Dof 3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01154 - - pcin:129293462 406.757