Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01152 ATGGTCTTCTCTTCCTTTCCACCCTATCATCTAGATCCACCACCCAACTGGCCTCACCAGCAGCCAGAGGGACTGATTCATGCCCAGGGTTCCCAGGTTCCGCCTCCGCCGCCGCCACTACCGGTTGCTGATGCCGGTGATGGCACCAAAGGCTCGACGAGGCCGGGATCCATGGCTGATCGAGCTCGGCTAGCGAAGATAGCACAGCCAGAAGGGGCACTGAAATGTCCACGGTGCGAATCAACCAACACCAAGTTCTGTTACTACAACAATTACAACCTCTCTCAGCCTCGCCACTTCTGCAAGACTTGCCGGCGATACTGGACCCAAGGTGGCGCGTTGAGGAACGTCCCAGTCGGAGGAGGTTGTAGAAGGAAGAACAAAAGAATCAAAGGAACTAACAGCAGAAAATCATCAAAATCTCCCAACAAAGCAGCATCAACATCAGGTCATCACTTATTACCATCTCCACCATTACTTTTCCCTCCTCCTCCTACTACATCTCATACTAGTTACAGTGACTACGACGTCGTTTTTGGGGCAACAAACATCAGAGATGCTGAATTTCAAATTGCTTGTAATAACAATATAATTGGCAATAATAACATCAATGGCTTTATTAGTACTACTGAGCAATGGAAGCTACCAAGTCTCCTGCAGCATCATCAACAGTTTCCTTCAACATTCTTGAGTAATTTGGAGGCTCCACCAGTAGGGTTATATCATCAGTTTGAAAGATCGGAAAATAATGCTGAGATCATCGAACCTTCAACGAAATTGTTATATTCTGGTGGTAGTGGAAATATTGGTAGTGATCATAATCATCATCATCTTCAGCTTACTACTACAGTCAAAATGGAGGAAAATATGGATCAAGTGTTGGGTTTATCCAAAAGTCTTACGGGTAACTCGGAAAATAATAATAATAATGAACAATTTTGGGAAGCAAATAATAATGGCAGTGCATGGAACATCAATAATGTTTCTATTAGTTTCGCTTCTTCTTCTTCTTCGGCCGCCACCCATCTCGTGTGA 1035 0.4464 MVFSSFPPYHLDPPPNWPHQQPEGLIHAQGSQVPPPPPPLPVADAGDGTKGSTRPGSMADRARLAKIAQPEGALKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTQGGALRNVPVGGGCRRKNKRIKGTNSRKSSKSPNKAASTSGHHLLPSPPLLFPPPPTTSHTSYSDYDVVFGATNIRDAEFQIACNNNIIGNNNINGFISTTEQWKLPSLLQHHQQFPSTFLSNLEAPPVGLYHQFERSENNAEIIEPSTKLLYSGGSGNIGSDHNHHHLQLTTTVKMEENMDQVLGLSKSLTGNSENNNNNEQFWEANNNGSAWNINNVSISFASSSSSAATHLV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01152 344 MobiDBLite consensus disorder prediction 136 150 - -
Accr1g01152 344 MobiDBLite consensus disorder prediction 1 58 - -
Accr1g01152 344 ProSitePatterns Zinc finger Dof-type signature. 76 112 IPR003851 GO:0003677|GO:0006355
Accr1g01152 344 MobiDBLite consensus disorder prediction 118 166 - -
Accr1g01152 344 Pfam Dof domain, zinc finger 73 128 IPR003851 GO:0003677|GO:0006355
Accr1g01152 344 ProSiteProfiles Zinc finger Dof-type profile. 74 128 IPR003851 GO:0003677|GO:0006355
Accr1g01152 344 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 63 301 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01152 Accr-Chr1 33339866 33341240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01152 54 131 C2C2-Dof Transcription Factor Family AT2G37590 82.051 5.70e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr1g01152 zf-Dof 2.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01152 - - pcin:129293462 409.838