Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00757 ATGCAGGAAATACATTCTATCGGGGGTAGTAGATTTTTCGACGGCGCTGGCGGTGGAACTGGCGGCGGAGATAGGAGAGTGAGGCCGCACCACCACCAGAACCAGCAGGCCTTGAAGTGCCCGAGGTGTGACTCCCTCAACACCAAGTTCTGTTACTTCAACAATTACAATCTCTCTCAACCCCGCCATTTCTGTAAGAACTGCCGGCGCTACTGGACCAAAGGCGGCGTCCTCCGTAACGTCCCCGTCGGCGGTGGATGTCGTAAATCCAAGCGTTCCAAGCCCAAAACCTCATCCTCTGCCGAACGTCCTCTCACGCCGACACGACCACCGGAGCATCCGCCGCCGCCGCAGGAGAACCGTAAGTCGAGTTCTCATTCCAGCAGCGAAAGCTCCAGCCTCGCCGCCGCCGCCGCCGCCGCCTCTGAAGTGGTATCGGCGCCTTCGTCGATGAACCGTGAGCTGCTAACCAATCAGGCTGCGAACCCTAATTCGGAGTCTGGATTGATGGAGAAAGGAGGGGACTGCGGTATTTTCTCGGAGATAGGCAGCTTTACAAACCTGATCACTGCAACAAGCGAGGCATTGTCGTTCGGGTTCGGGAATATTCCGGATCCGACGTCGTTTCGGTTCGGTACTACCACTCAACAAGGGATGACCGGGAATGAGTTATTATCCGGCGAGTGGCAGCAGGCACAGCAGAAAGAGACGGGAATGAGTGACATGATTTTTCAGCAGGAGTTGAAGTTGCCGGAGCTCATGCCTGGGTCGTTGTTCCACCCGACGGTGCCGGTGGATTTGTCGGCGTTGCAGAGTAAGAACGAGACCGGTGGTTTGGGACCGTTGGATTGGCAGGGAGGCGCAGAGCAAGGTTTGTTCGATCTGCCTAACACCGTAGATCATTCTTACTGGAGTCACACTCACTGGACTGATCAAGAAAATCCCAGTCTCTTTCATCTTCCTTGA 966 0.5559 MQEIHSIGGSRFFDGAGGGTGGGDRRVRPHHHQNQQALKCPRCDSLNTKFCYFNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSKPKTSSSAERPLTPTRPPEHPPPPQENRKSSSHSSSESSSLAAAAAAASEVVSAPSSMNRELLTNQAANPNSESGLMEKGGDCGIFSEIGSFTNLITATSEALSFGFGNIPDPTSFRFGTTTQQGMTGNELLSGEWQQAQQKETGMSDMIFQQELKLPELMPGSLFHPTVPVDLSALQSKNETGGLGPLDWQGGAEQGLFDLPNTVDHSYWSHTHWTDQENPSLFHLP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00757 321 MobiDBLite consensus disorder prediction 1 37 - -
Accr12g00757 321 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 30 214 IPR045174 GO:0003700|GO:0006355
Accr12g00757 321 Pfam Dof domain, zinc finger 36 92 IPR003851 GO:0003677|GO:0006355
Accr12g00757 321 MobiDBLite consensus disorder prediction 120 136 - -
Accr12g00757 321 MobiDBLite consensus disorder prediction 82 140 - -
Accr12g00757 321 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
Accr12g00757 321 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00757 Accr-Chr12 7347783 7348748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00757 24 318 C2C2-Dof Transcription Factor Family AT5G60850 40.952 4.39e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr12g00757 zf-Dof 6.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00757 - - qsa:O6P43_002258 324.324