Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00202 ATGACGCAATTCACACCAACACTACAACCTTTGCACCAAAGCAGCGATAACAACAACATTCTAGTACCTAGGATTACCAATTCATGGCCGAAATTCCAACAATCTAAGGCACTAGGAACCTTGGGCGATGGTAATTGCATGGAACAGTTGCTTATTCACTGTGCAGACGCCATCGAAGCCAATGACGTCACTCTCGCCCAACAAATCCTCTGGGTTCTCAACAACATCGCACCTCCTGAGGGCGACTCCAACCAGCGTCTCGTCGCCACATTCCTGAGAGCCCTCATTGCTAGAGCCACCAAATCTGGAAGCTCCAAATTGTTAGCCGCCGTAGCCGCGAGCTCCCACAACAACACCACCATCGCCACCAGCCTCGCCGTCCAAACCCACCGCTTCTCCGTCATGGAGCTTGCCGACTTCGTCGACGTCACTCCGTGGCATCGCTTCGGCTTCACCGCCGCCAACTCAGCCATTCTAGAAGCCACGGAAGGTTTCCCCACCATCCACATCGTTGACCTCAGCTCAACACACTGCATGCAGATTCCCACCCTAATTGACGCCATCGCTTCCCGCCACGACGTCCCTCCCCTGATCAAGCTCACAATCACGGAAGCTTCTAGAAACATCCCACCTATACTCAACCTATCCTACGACGAACTTGGATCAAAGCTGGTCAACTTCGCCAAGTCCAAAAACATTACGATGGATTTCAGAGTGATCCCTTCTACTCACGAAGACGGATTCGCCGCCCTGATCCAATACCTCGGGTTGCACCGCCACCGTGTCGTGACGTCGGAAGCTCTGGTGATAAACTGCCACATGATGCTTCATTGTATCCCCGACGAAACCCTATCTTCGGCTATTTCTCGTTCATCTCTAAGATCACTGTTTCTGAAGGCGCTACGGAGATTGAACCCAACGCTTGTCGTTTTGGTGGAAGAGGACGCGGATTTGACATGGAGTGATTTGGTGAGTCGGCTGAGGGCTGCGTTTAACTTTATGTGGATACCGTACGACACAGTGGAGACGTTACTTCAAAGAGGGAGTAAGCAGAGGCAGTGGTATGAAGCAGATATATGTTGGAAGATAGAGAATGTGATAGCGCAGGAAGGGATTGAGAGGGTAGAGAGATTGGAGGGTAAGATCAAGTGGGAGCAGCGTATGAGGAATGCTGAGTTTCAGGGGATTAGCTTCAGCCACGACGCCGTTTCGGAGGTGAAGGCCATGCTGGATGAACATGCAGCTGCGTGGGGATTCAAGAAGCAAGACCAACATCTTCTGCTCACTTGGAAAGGACATAATGTCGTTTTTGCCTCTGCTTGGTTTCCTGCTTAA 1335 0.5131 MTQFTPTLQPLHQSSDNNNILVPRITNSWPKFQQSKALGTLGDGNCMEQLLIHCADAIEANDVTLAQQILWVLNNIAPPEGDSNQRLVATFLRALIARATKSGSSKLLAAVAASSHNNTTIATSLAVQTHRFSVMELADFVDVTPWHRFGFTAANSAILEATEGFPTIHIVDLSSTHCMQIPTLIDAIASRHDVPPLIKLTITEASRNIPPILNLSYDELGSKLVNFAKSKNITMDFRVIPSTHEDGFAALIQYLGLHRHRVVTSEALVINCHMMLHCIPDETLSSAISRSSLRSLFLKALRRLNPTLVVLVEEDADLTWSDLVSRLRAAFNFMWIPYDTVETLLQRGSKQRQWYEADICWKIENVIAQEGIERVERLEGKIKWEQRMRNAEFQGISFSHDAVSEVKAMLDEHAAAWGFKKQDQHLLLTWKGHNVVFASAWFPA 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00202 444 ProSiteProfiles GRAS family profile. 38 442 IPR005202 -
Accr10g00202 444 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 46 432 IPR005202 -
Accr10g00202 444 Coils Coil 442 444 - -
Accr10g00202 444 Pfam GRAS domain family 47 441 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00202 Accr-Chr10 3613826 3615160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00202 31 443 GRAS Transcription Factor Family AT3G49950 58.273 2.60e-173 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr10g00202 GRAS 2.3e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00202 - - pcin:129296651 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00202 10 3613826 3615160 Accr10g00202 10 3613826 3615160 ECH