Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00092 ATGATTCAAGAACTGTTGGGTGCTTCTTCTTCTGGTTTCATATCAACCGGAGAAAGGAATAAAATCTCCATTAACGCCGCTTCTGTTCTTGCACCTCCCTTACCCTCTCCTTCTCTGCCTTCTTCCACGGCCGGCGCAGCCACCACCACCACCTCTGGTGCTACTGCTGCTGCTGCTGCCTCGTCGAATTCAGAGCACCAGAACCTGCGGTGTCCGAGATGCGATTCATCAAACACAAAATTTTGTTACTACAACAACTACAATCTCACACAGCCTCGCCACTTCTGCAAGACATGTCGCCGGTACTGGACCAAAGGAGGTGCTCTGAGAAACGTTCCAATCGGAGGCGGTTGCCGGAAAAACAAGAGCGTCGTCAGCTCGTCGACGTCATCCAACTCCGTGGCGGCGGCTAAGACAAGTGTGGCTGTGGCGGGTAACAGGATGAAAACGGCTGCGTCTGAGCTTGGAATATTAAGTAGGCCAGGACTTGGTGGCGGCGGCGGCTTCGATTATCATCAGGAGCTTCCGGCAAGCCCAATTTTGTGGGGTACGCCGCAAAATTCTCATCTGATGGCTTTGCTGAGAGCTAGCCACCAGAACCATAACCCTAACCCTAGCCCTTGTCCTCCAATACCTAATATTTCTGTGAAAGAAGGGAACTTGATGAGATCCCACATGGTGACTGAACCAATAATGGTTTCTAATAGCCTCCTCAACAATAATGTTCCTCCAACCTCTAACTTTGATCCTTCACTTGGTCTCACGAGCTCTTTCTGGAGAAACAACAATCTCGATCACCATCAACAATCACAAAATGGAGGTTTTGTCTATGGCGGCGGCGACCACCAAAACAGTAGTGGGATCCAAGAACTCTACCAGAGGCTCAGGTCGTCTTCTTCATCTTCACCTAACTATTGTAATGACGACTCGTCATCATCGCAGTTTCTAAGCAACATGTCTTCATCTTCTTCCTCTGTGGCCATTGTGGAGTCAACTGCAGCTAGTAATGGTGGGAGTGGAATTGGATTGGGGTACTGGAATAACCAACCTCTTTTCTGGTCAGATCTTCCAACGACCAATGGTGCACATCCGTAA 1095 0.4932 MIQELLGASSSGFISTGERNKISINAASVLAPPLPSPSLPSSTAGAATTTTSGATAAAAASSNSEHQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSVVSSSTSSNSVAAAKTSVAVAGNRMKTAASELGILSRPGLGGGGGFDYHQELPASPILWGTPQNSHLMALLRASHQNHNPNPSPCPPIPNISVKEGNLMRSHMVTEPIMVSNSLLNNNVPPTSNFDPSLGLTSSFWRNNNLDHHQQSQNGGFVYGGGDHQNSSGIQELYQRLRSSSSSSPNYCNDDSSSSQFLSNMSSSSSSVAIVESTAASNGGSGIGLGYWNNQPLFWSDLPTTNGAHP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00092 364 ProSiteProfiles Zinc finger Dof-type profile. 69 123 IPR003851 GO:0003677|GO:0006355
Accr10g00092 364 ProSitePatterns Zinc finger Dof-type signature. 71 107 IPR003851 GO:0003677|GO:0006355
Accr10g00092 364 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 59 299 IPR045174 GO:0003700|GO:0006355
Accr10g00092 364 MobiDBLite consensus disorder prediction 263 282 - -
Accr10g00092 364 Pfam Dof domain, zinc finger 67 123 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00092 Accr-Chr10 1467801 1468895 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00092 34 134 C2C2-Dof Transcription Factor Family AT5G65590 57.426 3.47e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr10g00092 zf-Dof 1.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00092 - - qsu:112033100 280.796