Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0813 ATGCAGGAAATACATTCTATCGGGGTTGGTAGATTTTTCGACGGCGGTGGCGGTGGAGCTGGCGGTGGAGATAGGAGGGTGAGGCCACACCATCACCAGAACCAGCAGGCCTTGAAGTGCCCGAGGTGTGACTCCCTCAACACCAAGTTCTGTTACTACAACAATTACAATCTCTCTCAACCCCGTCATTTCTGCAAGAGCTGCCGGCGGTACTGGACCAAAGGCGGCGTCCTCCGCAACGTCCCTGTCGGCGGTGGATGCCGTAAATCCAAACGTTCCAAGCCCAAAATCTCTTCCTCTGCAGAACGTCCTCTCACGCCGACACAACCACCGGCGCATCCGCCGTTGCCACAGGAGAACCGTAAGTCGAGCTCTCATTCCAGCAGCGACAGCTCTTGTCTCGCCGCCACATCCACCTCTGAAGCGGTTTCGGCGCCTTCATCGTTGAACCGTGAGCTGCTAACCAATCAGGCTACGAACCCTAACCCGGAGTCTGGATTGATGGAGCAAGGAGGGGACTGCGGTATTTTCTCGGAGATAGGGAACTTTACAAACCTGATCACTGCAACCAGCGAAGCATTGTCGTTCGGATTCGGGAATATTCCAGAGCCGACGTCGTTTCGGTTCGGTACTACCACTCAACAAGAAGGGATGGCGGGGAATGAGTTGTTATCCGGCGAGTGGCAGCAGACGCAGCAGCAAGAGACGGGGATGAGTGACATGATTTATCAGCAGGAGTTGAAGTTGCCGGAGCTCTTGCCTGGGTCGTTGCTCGACCCGACGGTGCCGGTGGATTTGTCGGCGTTGCAGAGTAAGAACGAGACCGGTGGTTTGGGACCGTTGGATTGGCAGGGAGGCGCAGAGCAAGGTTTGTTTGATCTGCCTAACACCATAGATCATTCTTACTGGAGTCACACTCACTGGACTGATCAAGAAAATCCCAGTCTCTTTCATCTTCCTTGA 963 0.5462 MQEIHSIGVGRFFDGGGGGAGGGDRRVRPHHHQNQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKSKRSKPKISSSAERPLTPTQPPAHPPLPQENRKSSSHSSSDSSCLAATSTSEAVSAPSSLNRELLTNQATNPNPESGLMEQGGDCGIFSEIGNFTNLITATSEALSFGFGNIPEPTSFRFGTTTQQEGMAGNELLSGEWQQTQQQETGMSDMIYQQELKLPELLPGSLLDPTVPVDLSALQSKNETGGLGPLDWQGGAEQGLFDLPNTIDHSYWSHTHWTDQENPSLFHLP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0813 320 MobiDBLite consensus disorder prediction 1 36 - -
Acco13g0813 320 Pfam Dof domain, zinc finger 36 92 IPR003851 GO:0003677|GO:0006355
Acco13g0813 320 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 30 214 IPR045174 GO:0003700|GO:0006355
Acco13g0813 320 MobiDBLite consensus disorder prediction 118 149 - -
Acco13g0813 320 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
Acco13g0813 320 MobiDBLite consensus disorder prediction 83 149 - -
Acco13g0813 320 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0813 Acco-ChrAcco13 6115392 6116354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0813 24 317 C2C2-Dof Transcription Factor Family AT5G60850 41.667 1.07e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco13g0813 zf-Dof 2.5e-33 No_clan