Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0732 ATGCAGGAATCTAGAGACCCTGCAATCAAGCTTTTCGGCCAGAAGATTCCTGTGCCCGGTGAGGGCGAGGTTCATGCCGGAGCCGTCTCTGTCGCCGATGATGCCGAAGACTATGAATCGCCGGACTCCATGGAGGTGGACGGACAAGAAGGAGGAGATTGTGATGATGGAGAACAACACAACTCAGAAGAGGAGAATAACGATGAAGATGACAAGGATCATTCAGCTGGAAACACTGCAGACAAAAAGAGAGAAGCTGATAATCCTCCAAACGCAGAAGAGACCAAGAATCCAGACTCACAGGCTGAGGCTAGTGTGAACCCGAAAACACCTTCCATAGATGAAGAGATTGCAAAATCAAACGGTGACAACAGCCCAGAGAAGGAGAAAAGTGATGCAGCCAACCCACAGGAAAAAACCCTGAAGAAGCCAGATAAAATACTTCCATGTCCTCGCTGCAACAGCATGGACACCAAGTTCTGCTATTACAACAACTACAACATCAATCAGCCTCGTTATTTCTGCAAAGCATGCCAAAGATACTGGACAGCAGGTGGTACCATGAGGAATGTACCAGTAGGGGCTGGTCGGCGAAAGAATAAGAACTCTTCTTCCCATTATCGCCACATCAGCATTTCAGAGGCTCTACAAGCAGCTAGAATTGATGCTCCAAATGGGACTCATCATCATCTTCCTGCGTTAAATGGAAATGGCAGAGTCCTCAGTTTTGGATTAGATGCTCCTATTTGTGATTCTATGGCATCTGTCCTGAATCTTTCAGAGAAAAAGGTCCTAAATGGTGTGAGAAATGGCTTTCACAGTAAAGCTGCTGAAACAGGTGGTGGTGGTGGTGGTGATGACTGCTCAAGTGCATCTTCCATTACAGTTTCAAATTCTATGGAAGAAAATGGCAAAAGTGTTTCCCAAGAATCATTGCTCAGAAATAATGGTTTTTCTCCTCCAATCCCATGTCTGCCTGGTGTTCCCTGGCCTTATCCTTGGAATGCTCCTGTTCCTTCACCTCCTTTATGCCCTCCAGGATTTCCCTTACCATTCTATCCTGCAGCCTTTTGGAACTGTGGTGTGCCAGGAAATTGGAATATACCCTGGTTTCCCCCACACCCTTCTGCTCAAAACCCAATATCTCCTACCACTACCAGTACTAGTCCTAATTCTCCAACATTAGGGAAGCATTCTAGGGATGGTGATGTGATCAGAACAGACAACTCACAGAAAGAAGAGCCATCATCAAAACCGAGAAATGGGTGTGTTTTGGTTCCTAAAACCTTGAGAATTGATGATCCAAGCGAAGCTGCAAAGAGCTCCATATGGGCAACTCTAGGAATCAAGAATGAATCAGCCAGTGGAGGAGGTATGTTTAAGGCCTTCCACTCTAAGAAGGATGAGAAGGATCATGCCTTTGAAACCTCGCTGGTGTTGCGGGCTAACCCTGCAGCCTTATCTAGATCCCTTAACTTCCATGAGAACTCCTGA 1494 0.4618 MQESRDPAIKLFGQKIPVPGEGEVHAGAVSVADDAEDYESPDSMEVDGQEGGDCDDGEQHNSEEENNDEDDKDHSAGNTADKKREADNPPNAEETKNPDSQAEASVNPKTPSIDEEIAKSNGDNSPEKEKSDAANPQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSSSHYRHISISEALQAARIDAPNGTHHHLPALNGNGRVLSFGLDAPICDSMASVLNLSEKKVLNGVRNGFHSKAAETGGGGGGDDCSSASSITVSNSMEENGKSVSQESLLRNNGFSPPIPCLPGVPWPYPWNAPVPSPPLCPPGFPLPFYPAAFWNCGVPGNWNIPWFPPHPSAQNPISPTTTSTSPNSPTLGKHSRDGDVIRTDNSQKEEPSSKPRNGCVLVPKTLRIDDPSEAAKSSIWATLGIKNESASGGGMFKAFHSKKDEKDHAFETSLVLRANPAALSRSLNFHENS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0732 497 MobiDBLite consensus disorder prediction 286 312 - -
Acco13g0732 497 MobiDBLite consensus disorder prediction 1 148 - -
Acco13g0732 497 MobiDBLite consensus disorder prediction 399 415 - -
Acco13g0732 497 MobiDBLite consensus disorder prediction 35 70 - -
Acco13g0732 497 ProSitePatterns Zinc finger Dof-type signature. 150 186 IPR003851 GO:0003677|GO:0006355
Acco13g0732 497 PANTHER CYCLIC DOF FACTOR 2 1 497 IPR045174 GO:0003700|GO:0006355
Acco13g0732 497 MobiDBLite consensus disorder prediction 380 396 - -
Acco13g0732 497 MobiDBLite consensus disorder prediction 71 92 - -
Acco13g0732 497 Pfam Dof domain, zinc finger 145 202 IPR003851 GO:0003677|GO:0006355
Acco13g0732 497 MobiDBLite consensus disorder prediction 377 423 - -
Acco13g0732 497 MobiDBLite consensus disorder prediction 93 108 - -
Acco13g0732 497 MobiDBLite consensus disorder prediction 276 312 - -
Acco13g0732 497 MobiDBLite consensus disorder prediction 120 146 - -
Acco13g0732 497 ProSiteProfiles Zinc finger Dof-type profile. 148 202 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0732 Acco-ChrAcco13 5403181 5405838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0732 1 495 C2C2-Dof Transcription Factor Family AT3G47500 49.608 1.29e-131 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco13g0732 zf-Dof 2.6e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2743 04 44241690 44243249 Acco13g0732 13 5403181 5405838 ECH
Acco13g0732 13 5403181 5405838 Acco13g0732 13 5403181 5405838 ECH