Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g2006 ATGATTCAAGAACTGTTGGGTGCTTCTTCTTCTGGTTTCATATCAACCGGAGATAGAAATAAAATCTCCATTAACGCCGCTTCTGTTCTCGCACCTCCCTTACCCTCTCCTTCTCTGCCTTCTTCCACGGCCGGCGCTGCTACCACCACCTCTGGTGCTACTGCTGCTGCTGCTGCTACCTCGTCGAATTCAGAGCACCAGAACCTGAGGTGCCCGAGATGCGATTCATCGAACACAAAATTTTGTTACTACAACAACTACAATCTCACGCAGCCTCGCCACTTCTGCAAGACATGTCGCCGGTACTGGACCAAAGGAGGTGCTCTGAGAAACGTTCCAATTGGAGGCGGATGCCGGAAAAACAAGAGCGTCGTCAGCCCGTCGTCGGCATCCAACTCCATGTCGGCGGCAAAGACAAGTGTGGCTGTGGCGGGTAACAAGATGAAAACAGCTGCGTCTGAGCTTGGAATAATAAGTAGGCCAGGACTTGGTGGCGGCAGCGGCTTCGATTATCATCAGGAGCTTCCGGCAAGCCCAATTTTGTGGGGTACGCCGCAAAATTCTCATCTGATGGCTTTGCTGAGAGCTAGCCACCAGAACCATAACCCTAACCCTAGCCCTTGTCCTCCAATACCTAATATTTTTGTGAAAGAAGAGAATTTGATGAGATCCTCCATGGTGACTGAACCAATAATGGTTTCTAATAGCCTCCTCATCAATAATGTTCCTCCGACCTCTAACTTTGATCCTTCACTTGGTCTCACGAGCTCTTTCTGGAGAAACAACAATCCTGATCACCATCAACAATCACAAAATGGAGGTTTTGTCTTTGGCGGCGGCGACCACCAAAACAGTAGTGGGATCCAAGAACTCTACGAGAGGCTCAGGTCGTCTTCTTCATCTTCGTCTAACTATTGTAATGACCACTCATCATCATCGCCGTTTCTAAGCAACATGTCTTCTTCTTCATCATCTTCTTCCTCTGTGGCCATTGTGGAGTCAACTCCAGCTAATAATGGTGGGAGTGGAATTGGATTGGGGTACTGGAATAACCAACCTCTTTTCTGGTCTGATTTTCCCACGACCAATGGTGCACATCCGTAA 1104 0.4855 MIQELLGASSSGFISTGDRNKISINAASVLAPPLPSPSLPSSTAGAATTTSGATAAAAATSSNSEHQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSVVSPSSASNSMSAAKTSVAVAGNKMKTAASELGIISRPGLGGGSGFDYHQELPASPILWGTPQNSHLMALLRASHQNHNPNPSPCPPIPNIFVKEENLMRSSMVTEPIMVSNSLLINNVPPTSNFDPSLGLTSSFWRNNNPDHHQQSQNGGFVFGGGDHQNSSGIQELYERLRSSSSSSSNYCNDHSSSSPFLSNMSSSSSSSSSVAIVESTPANNGGSGIGLGYWNNQPLFWSDFPTTNGAHP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g2006 367 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 59 300 IPR045174 GO:0003700|GO:0006355
Acco12g2006 367 MobiDBLite consensus disorder prediction 259 283 - -
Acco12g2006 367 ProSiteProfiles Zinc finger Dof-type profile. 69 123 IPR003851 GO:0003677|GO:0006355
Acco12g2006 367 ProSitePatterns Zinc finger Dof-type signature. 71 107 IPR003851 GO:0003677|GO:0006355
Acco12g2006 367 Pfam Dof domain, zinc finger 67 123 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g2006 Acco-ChrAcco12 31631591 31632694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g2006 34 134 C2C2-Dof Transcription Factor Family AT5G65590 57.426 4.81e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco12g2006 zf-Dof 1.9e-32 No_clan