Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2560 ATGGACACAGCTCAGTGGGCACAGGGGATTGGAGTGGTTAAACAGCCTGTGGTGGAAGGTAATCCAATTCCAAAGGCTCCTCCTCCTGGAATGGGCGAAAGGAAGGCAAGGCCACAGAAAGATCAAGCTTTGAACTGCCCAAGGTGCAATTCAACCAACACTAAGTTCTGCTACTACAATAACTATAGCCTCTCTCAGCCAAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACGGCAGGTGGGTCCCTCAGAAATGTTCCCGTCGGAGGAGGCTCCCGGAAGAATAAGCGATCTTCAACGACTTGTTCAAAGAAGCTTCCTGATCTGAACCCCAAGATCCAGCAAGGCCAAGATCTTAACTTAGCATGCCCACCACCAGCACCAGCACCCGATCAGGACTATAACAATAGCATATCCAAATTTATGGAGGTTCCTTTTAGTGCTCAAGACAATACTATAACTACAGCTTCTCATCATCATCATGATCAGTTGTCCTCCATGGAGCTTCTGAAAACTGGAATTCCGTCGTCAAGGACTACTTTGTGTTCTTTGATGCCTATGTCAGCGTCGGATTCTTCCGCTTCAGCAATGTATAATTCAAGCGGGTTTCTTAATTTGCAAGATTTGAAGCCTCCTCCGCCCGGGCTTAGTTTCAGTCTTGAAGGGTTTGCAAATAATGGGTACGCGGGTATTTCTGGGATGCACGAGGCAAGTAGTAGTGGCGATGATGGTGCAAGGTTGTTATTTCCTACTGAGGATTTGAAGCAAGGTGTTGGAAGTAGTACTGATCATTTTGAGCACAATAGAAGCCATGCGGATTCAACGGGGTTTTGGAATGGCGTGTTAGGTGGAGGATCCTGGTAA 867 0.4694 MDTAQWAQGIGVVKQPVVEGNPIPKAPPPGMGERKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTAGGSLRNVPVGGGSRKNKRSSTTCSKKLPDLNPKIQQGQDLNLACPPPAPAPDQDYNNSISKFMEVPFSAQDNTITTASHHHHDQLSSMELLKTGIPSSRTTLCSLMPMSASDSSASAMYNSSGFLNLQDLKPPPPGLSFSLEGFANNGYAGISGMHEASSSGDDGARLLFPTEDLKQGVGSSTDHFEHNRSHADSTGFWNGVLGGGSW 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2560 288 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 32 190 IPR045174 GO:0003700|GO:0006355
Acco10g2560 288 Pfam Dof domain, zinc finger 41 98 IPR003851 GO:0003677|GO:0006355
Acco10g2560 288 MobiDBLite consensus disorder prediction 93 111 - -
Acco10g2560 288 MobiDBLite consensus disorder prediction 85 111 - -
Acco10g2560 288 ProSitePatterns Zinc finger Dof-type signature. 46 82 IPR003851 GO:0003677|GO:0006355
Acco10g2560 288 ProSiteProfiles Zinc finger Dof-type profile. 44 98 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2560 Acco-ChrAcco10 36632983 36634300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2560 31 288 C2C2-Dof Transcription Factor Family AT3G61850 43.841 4.25e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco10g2560 zf-Dof 1.5e-33 No_clan