Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2495 ATGGAGTCTTCAGGGTGGCTCAGAGGCAAGATTATCGATGGAGCACCCTCTTGCCCTCGCTGTGCCTCCTCCAACACCAAGTTCTGTTACTTCAACAACTACAGCTTCTCCCAACCCAGGTACTTCTGCAAATCTTGTCGCCGCTACTGGACCAAAGGCGGCTCCCTCCGCAATGTCCCCATCGGCGGCGCTTCTCGTAAGTCCCGCCCTCCCAAGCCCTCTCGCTTTTCACCCCAAGCCTCACGCCTCTCCATCAGCGTCGTTTCCTGTTCTCACGACACACCTAATTCCGGTGGCTCCCATATTGACATGGCCCTATTGTTCTCCAAGTTTTTTAACCCCATGAATGGATCCTCCGAGTCTGGCACACCGGAAAGCGTGGAAGCCCAGAACGACGAGACTCAAGGGCCGTCTGATGCAGCCACAGGTTGCGATCTTGTTGATCTGATAGAAGGTATTTCTCAACAAGAGGCAGCTCAGAGTTTTTCGGGACATGAGTTGGAGGGCTTGTTCGGTGGGGATGAAGCAATACATGATGTGTTATGGTCTGATGTTACGACTACGACGCCTGCTGCTTTCGCCTGGCAACCTCCTAGCCCTATGATGGCATTTCCGCAGGAGTTGGAGTACTCGATTCCCTTCCACGACGACCATCAACTCCCAATTACTTCTACAGTGCTTCCTTCTATTTAA 693 0.5281 MESSGWLRGKIIDGAPSCPRCASSNTKFCYFNNYSFSQPRYFCKSCRRYWTKGGSLRNVPIGGASRKSRPPKPSRFSPQASRLSISVVSCSHDTPNSGGSHIDMALLFSKFFNPMNGSSESGTPESVEAQNDETQGPSDAATGCDLVDLIEGISQQEAAQSFSGHELEGLFGGDEAIHDVLWSDVTTTTPAAFAWQPPSPMMAFPQELEYSIPFHDDHQLPITSTVLPSI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2495 230 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 134 IPR045174 GO:0003700|GO:0006355
Acco10g2495 230 ProSiteProfiles Zinc finger Dof-type profile. 16 70 IPR003851 GO:0003677|GO:0006355
Acco10g2495 230 ProSitePatterns Zinc finger Dof-type signature. 18 54 IPR003851 GO:0003677|GO:0006355
Acco10g2495 230 Pfam Dof domain, zinc finger 16 69 IPR003851 GO:0003677|GO:0006355
Acco10g2495 230 MobiDBLite consensus disorder prediction 60 80 - -
Acco10g2495 230 MobiDBLite consensus disorder prediction 117 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2495 Acco-ChrAcco10 36239533 36240225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2495 15 114 C2C2-Dof Transcription Factor Family AT3G52440 61.000 3.17e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco10g2495 zf-Dof 2.2e-31 No_clan