Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1385 ATGGCTATGGTATTTTCACAGTATGATGTGTTCACAATATTTCTAGCAGGTAATAACATTGGAGATCTTCCTTCTTCCATGTGCAATCTTAGTCACTTGAAGTCACTTTGCCTAGATAACAATAACGTGAAGCAGATACCTGCAAATCTATTGAAAGACTGCACAGCTCTTCAAAGTATATCTCTGCACGGCAATCCTATATCTATAGATCAATTTCAACAGGGTAATTACGGACTGTTTTCATCAACCAAATTGTACTACTTTGCAGTTGACTATCCGATGGCGGCCCCATCGGCCATAGTGAATGCTGTAACTGCAATTTTGGAGGAGTTCCGCCGAGTTGTTCGGGAAGAACTCCACCAACTTCAGCTCCAGCAGCAGCCGGGACAGCAGCAGCCGGGCCAGCAGCAGCCGGGACAGCCGCGCAACAATCGATTTTGGACCCAAAGTGAGATATGTGCCTTGGTAGAATTGCGCATTAAACCCCCCCTTGAAAATCCAGGGAACATATGGGGGAACATATCAGAAGCTATGAGTAGAAAGGGATATATACGCACGCGAATGGCGTGCTCAAAAAAATGGTACACTCTAGTAGAGGATTATCTCCGTCTCATTGATGACGGGGCAGAAATCATTCTGGGTACTTACTTTTCTAAAATTGGTCGCTTCCTGAATGACGAACCTGGGTTTGAAGGTGGGGGGAGGAAGTGGTAG 714 0.4552 MAMVFSQYDVFTIFLAGNNIGDLPSSMCNLSHLKSLCLDNNNVKQIPANLLKDCTALQSISLHGNPISIDQFQQGNYGLFSSTKLYYFAVDYPMAAPSAIVNAVTAILEEFRRVVREELHQLQLQQQPGQQQPGQQQPGQPRNNRFWTQSEICALVELRIKPPLENPGNIWGNISEAMSRKGYIRTRMACSKKWYTLVEDYLRLIDDGAEIILGTYFSKIGRFLNDEPGFEGGGRKW 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1385 237 MobiDBLite consensus disorder prediction 124 143 - -
Acco10g1385 237 SUPERFAMILY Homeodomain-like 141 199 IPR009057 -
Acco10g1385 237 Pfam Leucine rich repeat 13 67 IPR001611 GO:0005515
Acco10g1385 237 Gene3D Ribonuclease Inhibitor 10 150 IPR032675 -
Acco10g1385 237 Gene3D - 151 203 - -
Acco10g1385 237 ProSiteProfiles Myb-like domain profile. 139 198 IPR001005 -
Acco10g1385 237 SUPERFAMILY L domain-like 12 86 - -
Acco10g1385 237 Pfam Myb/SANT-like DNA-binding domain 146 206 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1385 Acco-ChrAcco10 27628200 27631352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1385 145 223 Trihelix Transcription Factor Family AT5G47660 32.558 2.62e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco10g1385 Myb_DNA-bind_4 1e-06 CL0123