Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1851 ATGGACAGGAGTTTTATAGAAGGAAGCAACAACAATAATAATAACAATTCAGGCACAAAAGAAGTAGTAGGGTTAGGAGGAGAGAAGAAGGGAAGGCCGCAAGAACAACTGAACTGTCCAAGGTGCAATTCAACAAACACAAAGTTCTGCTACTACAACAACTATAGCCTCACACAACCCAGATATTTCTGCAAGACTTGCAGAAGGTACTGGACTGAAGGTGGGTCCCTCAGGAATGTCCCTGTTGGTGGAGGTTCCAGAAAGAACAAGAAGCTCTTCACTAATAATCCTAATTCATCTTCATCAACAAAGGTTCTTCCTGACTTGAATCCACCAACAACAAGTACTTCTTCTTCTCAGAACCCTAAATTGTTAATGCATGGAGGCCAAGATCTTAATCTGGCTTTCCCACCGATTAATGTGGACAATTATCGTCATTATCAAAGCTCTTCTTCTTCAACTTCTACTTCTGCTTTAGCGCTTCTAAGAGCAGGCATGAATAATAATAATAATAATCCGGCTTTTGTTCACAATCCAATACTGATGATGCCAAACTCAGATAACAACAACAACAATAATGGACTTTTCCCAGCTTCTGGTGGGTTTATGAGTCCCATTATGCATGAGGTTAAGCCAGGAAACCTTGGATTTTCAGTAGTGGATAATCATCAAGGGCTTCGAGGAGGAAGCAGATATGGTAGTGTTCATCATCATCATCAAGAGAATAGTGATGATAATAATATTAATGCTGGTGGAGCAAGGTTGTTGTTTCCTTTTGGAGATGTGAAGCAGATTCCCGAAGAAAATAAAGAACATGCAGCTGGGAATAATTCATCTTCTTCTGGGTATTGGACTGGTATGATTGGTGAAGGATCCTGGTAA 882 0.4025 MDRSFIEGSNNNNNNNSGTKEVVGLGGEKKGRPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKLFTNNPNSSSSTKVLPDLNPPTTSTSSSQNPKLLMHGGQDLNLAFPPINVDNYRHYQSSSSSTSTSALALLRAGMNNNNNNPAFVHNPILMMPNSDNNNNNNGLFPASGGFMSPIMHEVKPGNLGFSVVDNHQGLRGGSRYGSVHHHHQENSDDNNINAGGARLLFPFGDVKQIPEENKEHAAGNNSSSSGYWTGMIGEGSW 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1851 293 MobiDBLite consensus disorder prediction 1 21 - -
Acco09g1851 293 MobiDBLite consensus disorder prediction 81 122 - -
Acco09g1851 293 MobiDBLite consensus disorder prediction 1 38 - -
Acco09g1851 293 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 22 196 IPR045174 GO:0003700|GO:0006355
Acco09g1851 293 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Acco09g1851 293 Pfam Dof domain, zinc finger 35 91 IPR003851 GO:0003677|GO:0006355
Acco09g1851 293 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Acco09g1851 293 MobiDBLite consensus disorder prediction 228 250 - -
Acco09g1851 293 MobiDBLite consensus disorder prediction 89 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1851 Acco-ChrAcco09 35356295 35357176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1851 29 293 C2C2-Dof Transcription Factor Family AT3G61850 44.599 2.59e-59 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco09g1851 zf-Dof 2.5e-33 No_clan