Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0034 ATGGTTTTTTCTTCCATGCATCCTTATCTTGATCCAGCCAACTGGCAACAACAGCAACCCAATAATCATCAGATTGGAAGTAGCAATACCGGCACAGGCTCTCAGCTTCTTCCTCCTCCACCGCCGCCACTGCCACCTGTTCAGTCTCATGGCGGAGCTAGTGGCTCCAGCTCCATCAGGCCAGGTTCCATGGCTGATAGGGCCCGGATGGCCAACATACCGATGCCGGAGGCAGCGCAGAAATGCCCTCGCTGCGATTCCACCAATACTAAGTTTTGCTACTTCAACAACTACAGCCTCTCTCAGCCTCGCCACTTCTGCAAGACCTGTAGAAGGTACTGGACCAGAGGTGGGGCCCTGCGAAGTGTCCCCGTCGGTGGGGGGTGCCGGAGGAACAAGAGAAGTAGCAAAGGAAGCAGCTCAAAGTCGCCACCAGTGAGCTCAGATCGCCAGACTGGCAGTGTTAATTCAACCAACTCTTCCAACACTTCTTCTGCGGCAGCAGATATAGTAGGCCTTTCGCCTCAGGTTCCATCTCTGAGGTTCACGCCTCCTTTGCATCAACTAACTGAGTTCGGATCTGGAGAGATGGGATTGAACTATGGTCTGAGTAATTATAGCGCAGCGGGAGGAGCGGGAGGAGTAGGTGACTTAGGTTTCCATATAGGAACCGCTTTCGCCGGAGGAGCAAGTGGCAGCGGCAGCTCCGTCATCTTATCCGCGGCCGGGTTGGAGCAGTGGCGTATGCCACAAACACAACAATTTCCCTTCTTAACTGGTTTGGTAGCTTCGCCTCAACTGTACCAATTTGAAAGTGGATCAGCTGCAGTGCCGGGATATGGAGGCGGCGGCCCAAGTCAACTCCGGCCAAAGGGGCCAACTGGGGTGATAACTCAACTAGCTTCAGCGAAAATGGAGGAAGACCATTATGATCACCAGGAACTAAATTTGTCAAGGCACTTCTTGGGGATAAATAATAATAATTCAACAAATCATGAGCAGTATTGGAATACTACTACAGCGCGTAATTCTAATACTTCTGCTGCTAATTGGACTGATCTTTCTGGGTTTATCTCTTCTTCCTCTCCCAGCAACAATCCGCCATAG 1107 0.514 MVFSSMHPYLDPANWQQQQPNNHQIGSSNTGTGSQLLPPPPPPLPPVQSHGGASGSSSIRPGSMADRARMANIPMPEAAQKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSSKGSSSKSPPVSSDRQTGSVNSTNSSNTSSAAADIVGLSPQVPSLRFTPPLHQLTEFGSGEMGLNYGLSNYSAAGGAGGVGDLGFHIGTAFAGGASGSGSSVILSAAGLEQWRMPQTQQFPFLTGLVASPQLYQFESGSAAVPGYGGGGPSQLRPKGPTGVITQLASAKMEEDHYDHQELNLSRHFLGINNNNSTNHEQYWNTTTARNSNTSAANWTDLSGFISSSSPSNNPP 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0034 368 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 61 271 IPR045174 GO:0003700|GO:0006355
Acco09g0034 368 MobiDBLite consensus disorder prediction 124 165 - -
Acco09g0034 368 MobiDBLite consensus disorder prediction 11 62 - -
Acco09g0034 368 Pfam Dof domain, zinc finger 79 134 IPR003851 GO:0003677|GO:0006355
Acco09g0034 368 ProSitePatterns Zinc finger Dof-type signature. 82 118 IPR003851 GO:0003677|GO:0006355
Acco09g0034 368 ProSiteProfiles Zinc finger Dof-type profile. 80 134 IPR003851 GO:0003677|GO:0006355
Acco09g0034 368 MobiDBLite consensus disorder prediction 138 165 - -
Acco09g0034 368 MobiDBLite consensus disorder prediction 11 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0034 Acco-ChrAcco09 371729 372980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0034 53 335 C2C2-Dof Transcription Factor Family AT3G55370 42.373 1.74e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco09g0034 zf-Dof 1.2e-31 No_clan