Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0237 ATGGATCCCTCTAGTGCACAACACCAGCAAATGCCTAGCCAGTCGTCACTGGAGAATATGTTGGCTTCTTCAAAGGCACAGAATAATCAGGAGAGAAAGCCAAGACCTCAGCCTGAACAAGCCCTGAAATGTCCAAGATGCGACTCTTCAAACACCAAATTCTGTTACTACAACAATTACAGTCTCTCTCAACCAAGATATTTCTGCAAATCTTGCAGGAGATATTGGACCAAAGGAGGAACTCTGAGAAATGTCCCAGTGGGTGGAGGCTGCAGGAAAAACAAAAGGTCCTCATCGTCTTCCTGTTCATCAAAACGAGCTCAGGATCAGTCGTTCACACCCAATTCCAATCCCCTCATCACTACCCTACCTCCATTATCATATGACCCCAATGACCTCACTCTTGCGCTAGCTAGACTCCAGAAACAATCTTGTGGACAATTTGGCTTTGAAAACCATGATTTTTCTGTTCTGGGAAATTCTCTTGGAAATATCTCTTCCACGAACACTGGATTTCTAGATGCACTTCGTTGCGGATTCCTTGAAACACAGAGTAATAGTAATCTTCAGAATCTGTACTATGGATATGGAAATGGAGACTTGGGAGAGGTGGACAATGGAAGTAACAGTAACAATGCTTGTGGGATTACTGGGGTTAGTGGAGAGATGATGCTTCCATTTGATCAAGAAACGAGTACTGCAACTACTCAAGCTGTCACTGTCACTACCATGAAGCAAGAAATCTGCAATAATGGCAGAGAACAAGGTGATACTAATAAGGTTTTGTGGGGTCTTCCATGGCAGCTTAATAACGGGCACACAAACATGGGTGAAATTGATTCAGGAAGAGCAAATTGGAACAGTCTCACGTCGTCATCTTGGCACGGGCTACTTAATAGTCCCCTAATGTAA 912 0.4364 MDPSSAQHQQMPSQSSLENMLASSKAQNNQERKPRPQPEQALKCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSSCSSKRAQDQSFTPNSNPLITTLPPLSYDPNDLTLALARLQKQSCGQFGFENHDFSVLGNSLGNISSTNTGFLDALRCGFLETQSNSNLQNLYYGYGNGDLGEVDNGSNSNNACGITGVSGEMMLPFDQETSTATTQAVTVTTMKQEICNNGREQGDTNKVLWGLPWQLNNGHTNMGEIDSGRANWNSLTSSSWHGLLNSPLM 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0237 303 MobiDBLite consensus disorder prediction 87 124 - -
Acco08g0237 303 MobiDBLite consensus disorder prediction 93 124 - -
Acco08g0237 303 Pfam Dof domain, zinc finger 40 96 IPR003851 GO:0003677|GO:0006355
Acco08g0237 303 ProSitePatterns Zinc finger Dof-type signature. 44 80 IPR003851 GO:0003677|GO:0006355
Acco08g0237 303 MobiDBLite consensus disorder prediction 1 44 - -
Acco08g0237 303 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 18 206 IPR045174 GO:0003700|GO:0006355
Acco08g0237 303 MobiDBLite consensus disorder prediction 1 35 - -
Acco08g0237 303 ProSiteProfiles Zinc finger Dof-type profile. 42 96 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0237 Acco-ChrAcco08 1763950 1765486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0237 40 303 C2C2-Dof Transcription Factor Family AT2G28510 41.877 8.83e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco08g0237 zf-Dof 7.3e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3821 01 53971579 53977282 Acco08g0237 08 1763950 1765486 PCT