Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2017 ATGGCCGATGTGAAGAACGGCCAAGATAATCATGAGGGGATAAAGCTGTTTGGGGCTACGATCACGTTGCATCGGGCAAGAAAACTGGAACAGAATAAGGTGGAGGAGGAGGATCGGACGTCGACGACGCCGGAGAAGAGGCCCGACAAGATCATACCATGTCCAAGATGTAATAGCATGGACACCAAGTTTTGTTACTTCAATAATTATAACGTTAATCAGCCCAGGCATTTCTGTAAGGGGTGTCAGAGATACTGGACGGCCGGCGGCGCCCTCCGGAACGTGCCTATCGGTGCCGGTAGGAGGAAGGCCAAGCCACCTTTCCGTGGTGCGGCTGGATTCTCGGAGGGATGTGGCTTCGACGAATCTGTCGTCGGCGACAGCGGCGGCGGCGGATACCGTCGGTTTGGTTTGGACGAGGGGCTGGGTATTATGGACGAATGGCATGTTACGGTGGCTCAGGGTGGTTTCCGGCACCTTCTGCCGGCGAAACGGCCTAGGATTGCCGGTCAACCTTTTTAA 522 0.5517 MADVKNGQDNHEGIKLFGATITLHRARKLEQNKVEEEDRTSTTPEKRPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKAKPPFRGAAGFSEGCGFDESVVGDSGGGGYRRFGLDEGLGIMDEWHVTVAQGGFRHLLPAKRPRIAGQPF 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2017 173 Pfam Dof domain, zinc finger 50 105 IPR003851 GO:0003677|GO:0006355
Acco06g2017 173 ProSitePatterns Zinc finger Dof-type signature. 54 90 IPR003851 GO:0003677|GO:0006355
Acco06g2017 173 ProSiteProfiles Zinc finger Dof-type profile. 52 106 IPR003851 GO:0003677|GO:0006355
Acco06g2017 173 PANTHER CYCLIC DOF FACTOR 2 32 105 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2017 Acco-ChrAcco06 15182073 15182594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2017 9 167 C2C2-Dof Transcription Factor Family AT2G34140 52.907 1.73e-52 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco06g2017 zf-Dof 2.4e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2017 06 15182073 15182594 Acco06g2017 06 15182073 15182594 ECH