Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1802 ATGGACACAGCTCAGTGGGCACAGCACCATCAGGGGAATATTGGAGTGGTTAAACCTATGGAATTAGGTTCATCAAATCCAAAGCCAGCTCCTATGTTGGAGAAAAAGGCAAGGCCACAGAAAGATCAAGCCTTGAACTGTCCAAGGTGCAATTCAACCAACACAAAATTCTGTTACTACAACAACTATAGCCTCTCTCAGCCCAGATACTTCTGTAAGACTTGTAGAAGGTATTGGACTGAAGGTGGCTCTCTCAGGAATGTTCCTGTTGGTGGTGGTTCCAGAAAGAACAAGAGACCTTCTTCTAATTCTTCTTCATCTTCTTCCTCAACATCTTCAAAGAAGATTCCAGAACCTTCTCCTCCTTCGCAGAACCCAACCACCAGCAACAACAACAACAAGATCCACCAGGCCCAAGATCTTAACTTGGCATACCCAGAGCGAGCTGGTGGGATGTTACAACATGAGATTTCTAGAAATTCTAATAATTCTTCGAGGGGTTTGATGAGTTCCTTGATTCCCATGTCGGTTTCATCAGATGGAAGCATGATGTATGAAAATAATGGCAATAATTCAGCTCCTCATCCTCATCATGGTGGGTTTCCTTTGGAGTTCAAGCCTCATCATCATCATCATCAAGGTCTTAATTTTAGCTTCGAGGGGTTTGAGAATAATAATGGGTTAATTGGAAGTAGTGGTCTTCATCATCATCATCAGGGAATGCAATTGGGTAATTCTTCAGCTATTGTTGGTGGTGCAAGGATCTTGTTTCCCATTGAAGATTTGAAGCTGCACGTGCCAAGCACTACCACTACTAGTCAAGAGTTTGATCAGCAAAATAATCGAGCAACAAGCCATGGAGATCCAAGTGGGTTTTGGAATGGCATGTTAGGTGGAGGAGCATGGTAG 909 0.4323 MDTAQWAQHHQGNIGVVKPMELGSSNPKPAPMLEKKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPSSNSSSSSSSTSSKKIPEPSPPSQNPTTSNNNNKIHQAQDLNLAYPERAGGMLQHEISRNSNNSSRGLMSSLIPMSVSSDGSMMYENNGNNSAPHPHHGGFPLEFKPHHHHHQGLNFSFEGFENNNGLIGSSGLHHHHQGMQLGNSSAIVGGARILFPIEDLKLHVPSTTTTSQEFDQQNNRATSHGDPSGFWNGMLGGGAW 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1802 302 ProSitePatterns Zinc finger Dof-type signature. 47 83 IPR003851 GO:0003677|GO:0006355
Acco05g1802 302 Pfam Dof domain, zinc finger 42 99 IPR003851 GO:0003677|GO:0006355
Acco05g1802 302 MobiDBLite consensus disorder prediction 1 42 - -
Acco05g1802 302 MobiDBLite consensus disorder prediction 269 302 - -
Acco05g1802 302 MobiDBLite consensus disorder prediction 83 134 - -
Acco05g1802 302 MobiDBLite consensus disorder prediction 96 118 - -
Acco05g1802 302 ProSiteProfiles Zinc finger Dof-type profile. 45 99 IPR003851 GO:0003677|GO:0006355
Acco05g1802 302 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 29 208 IPR045174 GO:0003700|GO:0006355
Acco05g1802 302 MobiDBLite consensus disorder prediction 269 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1802 Acco-ChrAcco05 34405438 34406998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1802 1 302 C2C2-Dof Transcription Factor Family AT4G24060 39.080 1.44e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco05g1802 zf-Dof 1.6e-33 No_clan