Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2853 ATGGAGCCTGGCTTGGTTTTGAGCGACACGCAATCCATCGGAGGAGGTGGGTTTTCCGGTGAAGACAGGAGGCTCAGACCTCACAGAAACGACAACCAGAACTACCAGTCCTTGAAGTGCCCGAGGTGTGACTCCCTCAACACCAAGTTCTGCTACTACAACAACTACAATCTCTCTCAGCCGCGCCATTTGTGCAGGAATTGCCGGAGATACTGGACCAAGGGCGGTGTCCTCCGTAACGTCCCCGTCGGCGGAGGTTGTCGGAAGACTAAGCGGTCCAAGCCCAAGAACTCTCCCTCCGCCGCTGCTGCGACAACAGCACCACCGCCGGTCCCATCGTCATCGCAACAGAAGCGCGAGCGTAAGGCGTCCAACTCTCATTCCAGCAGCGAAAACTCTAGTCTTACCGTGGCCACTGCCGCGACCGTCACCACAGAAGCGGTTTCAGCTCCTTCATCTAACTCCGCATCCAATAACTTGTTCGACAATCTTCAGGATTCGAGCCTCTTCGTCCATTCCAGTCCGAAGCCTAGCTCGGAGCCAGGCGTCGGCGAACAAGGAGTAGACTCCGGGATTTTCTCGGAGATAGAGAACTTGACGAGCCTGATCGCACCGACTAACGAGAACCTGACTTTTGGATACGGGAACATCACCGACGCGTCGTCGTTCCAGCTGTGCGGCGAGTGGCAGAAAGGGATGAACACGAGCGATCGTCGTCATCAGGAGTTGAAGTGGCCGGAGATGACGACGGCGGGATCACTGATGGAGGAGACGGTGGCGGGGGATTGGCGAGCGAGCTCGGATGATCAAGGTCTGTTTGTTGTCGATAACACTTTAGATGAGGGTGTGTGGAGTCGCAATCAGTGGAATGAAGACAATTCGAGTCTTTTTCATCTACCTTGA 903 0.5537 MEPGLVLSDTQSIGGGGFSGEDRRLRPHRNDNQNYQSLKCPRCDSLNTKFCYYNNYNLSQPRHLCRNCRRYWTKGGVLRNVPVGGGCRKTKRSKPKNSPSAAAATTAPPPVPSSSQQKRERKASNSHSSSENSSLTVATAATVTTEAVSAPSSNSASNNLFDNLQDSSLFVHSSPKPSSEPGVGEQGVDSGIFSEIENLTSLIAPTNENLTFGYGNITDASSFQLCGEWQKGMNTSDRRHQELKWPEMTTAGSLMEETVAGDWRASSDDQGLFVVDNTLDEGVWSRNQWNEDNSSLFHLP 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2853 300 MobiDBLite consensus disorder prediction 82 137 - -
Acco04g2853 300 MobiDBLite consensus disorder prediction 96 119 - -
Acco04g2853 300 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
Acco04g2853 300 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 29 197 IPR045174 GO:0003700|GO:0006355
Acco04g2853 300 MobiDBLite consensus disorder prediction 1 38 - -
Acco04g2853 300 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
Acco04g2853 300 Pfam Dof domain, zinc finger 37 92 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2853 Acco-ChrAcco04 45151664 45152566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2853 22 300 C2C2-Dof Transcription Factor Family AT5G60850 39.576 3.93e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco04g2853 zf-Dof 2.5e-32 No_clan