Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2578 ATGGATTTTTCTCCTCTTCACGAGCACGTCTGCATGGAATCTTCGGATCACTGGCTTCAGGGAGCAATTCAAGAGGAATCTGGAGGAGTAGCAATGGATTCTTCATCTTCGTCTCCACCATTAATGGAGAGGAGGGTAAGGCCTGCACCAACAGACCAAGCTTTGAAGTGTCCGAGGTGTGATTCGACAAATACCAAGTTCTGCTACTACAACAACTATAGTCTCTCTCAGCCAAGGTACTTCTGCAAAACTTGCAGAAGGTACTGGACCAAAGGAGGCACATTGAGAAACATCCCAGTAGGTGGAGGTTGCAAAAAGAACAAGAAAGTCTCATCCAAGAAACAAAACGACGTCGTTCATCACTCACAGTCGTTGGAATTACCCAATAATAAAGATCTTCATCAACTCACAGCAGCCTCTAGTTTCCCAGATCATCATGCTATTCATTTTCCCCATTCAGTGGGACTAATGGTGGAGAATAATTCTTCCAGGCTCATGATAAATAATGTTATGGGAAATATTGGTGATAGCACTGCGAATATTGCTGATCAGGTAAATTATAGCCATAATGGGTTATTGGCACAGAGTTATTTCCAGGGTTTTGGAGGAAATATGTGTTACTTTGATGGCTTTAATAGTAATGGTGGGACTTATAGCACAATGGACCCTTTTTACCATGGAAATGATGAGGATCAAAATGTTGGTGCAATTATTCATGATGTGAAGCCAAATACTAAGATTTTGTCTCTTGAATGGCAAGACCACCACCAAGGTTGTTCTGATGCTGGGAAAGATCCTTTTGGGTATATCAACACTAGTACGTTGGGATCATGGACTGGTATGATCAATGGTTATGGACCCTCCACAACAAACCCTTTGATCTGA 885 0.4203 MDFSPLHEHVCMESSDHWLQGAIQEESGGVAMDSSSSSPPLMERRVRPAPTDQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCKKNKKVSSKKQNDVVHHSQSLELPNNKDLHQLTAASSFPDHHAIHFPHSVGLMVENNSSRLMINNVMGNIGDSTANIADQVNYSHNGLLAQSYFQGFGGNMCYFDGFNSNGGTYSTMDPFYHGNDEDQNVGAIIHDVKPNTKILSLEWQDHHQGCSDAGKDPFGYINTSTLGSWTGMINGYGPSTTNPLI 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2578 294 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 42 184 IPR045174 GO:0003700|GO:0006355
Acco04g2578 294 MobiDBLite consensus disorder prediction 28 49 - -
Acco04g2578 294 Pfam Dof domain, zinc finger 52 109 IPR003851 GO:0003677|GO:0006355
Acco04g2578 294 ProSitePatterns Zinc finger Dof-type signature. 57 93 IPR003851 GO:0003677|GO:0006355
Acco04g2578 294 ProSiteProfiles Zinc finger Dof-type profile. 55 109 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2578 Acco-ChrAcco04 42664628 42665859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2578 32 112 C2C2-Dof Transcription Factor Family AT5G60200 70.370 1.57e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco04g2578 zf-Dof 1.3e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2578 04 42664628 42665859 Acco13g0610 13 4425585 4427088 PCT