Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1204 ATGTTGGATAGCTGTGAGAAAATGGTACTCATCCCTCAAAACACTAAACAATGGCCACACCCACAGAGGCAGGATCATGCGATAGATGATCAAAAGGTTTCGACGGCTGCTTCTTCTCCTTCTTCCTCAGCATCTCAAAGGGTTATGGAAAAACCAAACCAAGAGCTTCTTCAACAGCAACAAGAAGCTCTAAAGTGTCCTCGATGTGACTCATCAAACACAAAGTTCTGTTACTACAATAATTATAGCTTGTCTCAGCCTAGACACTTCTGCAAAGCCTGCAAGCGATACTGGACTCGAGGAGGTACCTTAAGGAATGTTCCTGTTGGTGGAGGTTGCAGAAAAAACAAGCGTACTCTCAAGCGTCCTAATTCATCAGCTTCATCAGAAATTCACAATAATATTATTACTACGCCTTCTTCTAATTCTTCTTCTTATACCGTCTCAGCTGTTTCAATTTCAAACCCTCCTTCACAATCTCATCAGATCGATATTGATTCCACCTCCAATCACATCAGTCCTTTATTTTATGGCATGAATCTTCCGTTTCCAAGGTTCAATTCCACTTCTGTGTTTGATCATCATCATAATTCCCTTGGATTGGATTTCATTGATAATACTGCTGGTTACCGAAATGGGTTTTCTTCAAATCACACACTTGTTTCAAGTTATACTTCTTCTATCTTTGGTAGTTCCTCCTCCTCCTCTTCTTCTTCAACATCAGTAACCACATCCAGTACTGTTCCTCCTCCCCTTCCTCCTATCATGGCTTCACTGTTAAGCTCTACAAATCTACAGCAACAAAAGTTCATCAATAATGGTGGGGCTACTAATAACAGTACTTTTCAGGGGTTCATCAATAATAGCAATAACAGTACGAGTACTAAGACTGAGATGGTTGCTTTAAAAGAAGTGAAATCTGTGGTAGTGGGGGAAGATGATGAGAGTAACAGATTTCTGGGTTGGCAAAATAACCAACAGATCGAGCATCATCAAGGAGGAGGTTTGATTATGTCTGATCCAACTTCATCACTTTACTGGAACCCTACTACTGCAACAGCTATGGGTACTACTAATACTTGGAATGATCAAACCAATATTGGTCCTCATCAGTCACTTCTCTCATCATCTGATCTACAATAA 1143 0.4033 MLDSCEKMVLIPQNTKQWPHPQRQDHAIDDQKVSTAASSPSSSASQRVMEKPNQELLQQQQEALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRTLKRPNSSASSEIHNNIITTPSSNSSSYTVSAVSISNPPSQSHQIDIDSTSNHISPLFYGMNLPFPRFNSTSVFDHHHNSLGLDFIDNTAGYRNGFSSNHTLVSSYTSSIFGSSSSSSSSSTSVTTSSTVPPPLPPIMASLLSSTNLQQQKFINNGGATNNSTFQGFINNSNNSTSTKTEMVALKEVKSVVVGEDDESNRFLGWQNNQQIEHHQGGGLIMSDPTSSLYWNPTTATAMGTTNTWNDQTNIGPHQSLLSSSDLQ 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1204 380 MobiDBLite consensus disorder prediction 31 50 - -
Acco03g1204 380 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 47 268 IPR045174 GO:0003700|GO:0006355
Acco03g1204 380 MobiDBLite consensus disorder prediction 13 50 - -
Acco03g1204 380 ProSitePatterns Zinc finger Dof-type signature. 66 102 IPR003851 GO:0003677|GO:0006355
Acco03g1204 380 ProSiteProfiles Zinc finger Dof-type profile. 64 118 IPR003851 GO:0003677|GO:0006355
Acco03g1204 380 MobiDBLite consensus disorder prediction 357 380 - -
Acco03g1204 380 Pfam Dof domain, zinc finger 62 118 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1204 Acco-ChrAcco03 27734501 27735890 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1204 64 179 C2C2-Dof Transcription Factor Family AT1G28310 59.483 5.44e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco03g1204 zf-Dof 2.2e-33 No_clan