Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1203 ATGAATATTCAAGAAGGTAGTGCCGGTGGCGGTGGTGCTGGTAGAGGAGGAGGTGCGGGGAATGATCAATCTCAGCCGCAGCCGCAGCCGCCGCAGAGATGCCCTCGGTGTGACTCTGTGAACACCAAGTTCTGTTACTACAACAACTACAGCCTCTCGCAGCCAAGGTACTTCTGCAAAACGTGTAAAAGGTACTGGACCCATGGCGGATCGTTGCGAAACATACCCATCGGTGGTGGTTGTCGGAAGGGAAAGCGGACCAAAACGTCGTCGTCAGCTTCTTCGTCATCATCCACCGCCCTACAGCTGTTGAGCTGCCCATCGCAGCTGCAACCTACGCAACCAAACCTGATGATGACCTCCCCGGCTTCACGCGTTTTGGCCGGTCGTTCTTCTGCGGAGGCGGCGTTGGCGGCGTCAGGGGTTCCATTGATCTGCTCCTACTATCAAGATGGTGGTTATCTTTCATCTGCGGCTGCGATTCACTCCCAAAACCCATTATCACGGCCATTGTTCAATCTGTCCTCTCTGAATCTCTCTCCTTCGTCCAATCCGGGTCTTCTTCATCCTTGGTTCAATCATGCTCCGTCGACTCAGGCCTTAAGGAGCCAAATTCCTCCGCGTTCCTTGCCGGTATTCCAATGGGCGGCAAACAGAAGCAGCAGGGAGGTAGAATCTGTTGAATCTCTGCACGCATCTGATGATCATCATCATCAAGGTATGATTCAAACGAGCATGAACATGATGATGGGTGGTAATAGCAGTCACGCTTCTCTTCATGATTGGTCTCAGAACTCATTGTGGAGTACTGTAAGCACAACTTCCATGGGTGACAATTCTGGGAGTCCCAGTAATAACAATGATGACCATAGTAATGATAATAATAATAACGCTAATAAAGCTGGTGGATCATCTTCTCTTAGTGGAAATCAATGGCCTGACCTACCAGGCGGTTATTGCCCTCCTCCATGA 972 0.5072 MNIQEGSAGGGGAGRGGGAGNDQSQPQPQPPQRCPRCDSVNTKFCYYNNYSLSQPRYFCKTCKRYWTHGGSLRNIPIGGGCRKGKRTKTSSSASSSSSTALQLLSCPSQLQPTQPNLMMTSPASRVLAGRSSAEAALAASGVPLICSYYQDGGYLSSAAAIHSQNPLSRPLFNLSSLNLSPSSNPGLLHPWFNHAPSTQALRSQIPPRSLPVFQWAANRSSREVESVESLHASDDHHHQGMIQTSMNMMMGGNSSHASLHDWSQNSLWSTVSTTSMGDNSGSPSNNNDDHSNDNNNNANKAGGSSSLSGNQWPDLPGGYCPPP 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1203 323 MobiDBLite consensus disorder prediction 270 323 - -
Acco03g1203 323 MobiDBLite consensus disorder prediction 85 100 - -
Acco03g1203 323 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 21 284 IPR045174 GO:0003700|GO:0006355
Acco03g1203 323 MobiDBLite consensus disorder prediction 270 312 - -
Acco03g1203 323 Pfam Dof domain, zinc finger 31 86 IPR003851 GO:0003677|GO:0006355
Acco03g1203 323 ProSiteProfiles Zinc finger Dof-type profile. 32 86 IPR003851 GO:0003677|GO:0006355
Acco03g1203 323 ProSitePatterns Zinc finger Dof-type signature. 34 70 IPR003851 GO:0003677|GO:0006355
Acco03g1203 323 MobiDBLite consensus disorder prediction 77 100 - -
Acco03g1203 323 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1203 Acco-ChrAcco03 27670122 27671093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1203 21 99 C2C2-Dof Transcription Factor Family AT5G60200 67.416 6.21e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco03g1203 zf-Dof 6.2e-32 No_clan