Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1294 ATGTTGGACATTTTAGACTGGCTTAGTGCCTATGCTGGTGATATTACTGTCTTGGTAAAAGAGATTATGGAGAGAGGGTGGAAGCATAATTCAGAGATATCACCTAATTGTCCGAGGTGTGGCTCTTGCAACACCAAGTTCTGCTATTACAATAACTACAGCTTAACTCAACCTCGCTACTTTTGCAAAGCCTGCAGAAGGTACTGGACCAAAGGAGGATCCCTCCGCAACGTCCCCGTCGGCGGTGGCTGCCGGAAAACCAGGCGCCATGCTAGCAAGACTTTAAGACTACACTCATCAGCCTTGCCTTCTCCACCTAATGCTGCTTATCATCATCATGCCCATCACTCTACTGTTTCTTTAGCGGGGTCTGATCACCATGCTCCACATATTGATCTTGCACTCATTTACTCGAATTTTCTCAATCAAAACCCAGATTCAAGTGATCAGGAGCCACATCATCAATTCATGAAAACTCTAGGTTTTGATCCTTGCGTAGAGTATCCGAGTCTATCCGACATAGTTTTTGGTCTTTCTGAACCATCAACAGTAGAATCCCATTTCAATGTTGCTGAGGATCACCGTCATCATTTAGGTGGGTTATTTAACTCCATGCAGGAGCATAAAGAAGACAGAATAATTGGTACTGGCGATTTTGAGCTTCCGCCATTACCAGGAGAAGAGTTAGCCCAGCAATATGATATGACGACGTGGTCCGAATCTTATGATGAGATGATGGTCGTAAACCCGGCGCCACTTGGAACTCAACCTCATGTGAACGGTAACTGGGGACACTTTCATTACTCAACCAATGTTTCTTTTCCAAACCTTTGA 834 0.446 MLDILDWLSAYAGDITVLVKEIMERGWKHNSEISPNCPRCGSCNTKFCYYNNYSLTQPRYFCKACRRYWTKGGSLRNVPVGGGCRKTRRHASKTLRLHSSALPSPPNAAYHHHAHHSTVSLAGSDHHAPHIDLALIYSNFLNQNPDSSDQEPHHQFMKTLGFDPCVEYPSLSDIVFGLSEPSTVESHFNVAEDHRHHLGGLFNSMQEHKEDRIIGTGDFELPPLPGEELAQQYDMTTWSESYDEMMVVNPAPLGTQPHVNGNWGHFHYSTNVSFPNL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1294 277 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 31 177 IPR045174 GO:0003700|GO:0006355
Acco02g1294 277 Pfam Dof domain, zinc finger 36 89 IPR003851 GO:0003677|GO:0006355
Acco02g1294 277 ProSitePatterns Zinc finger Dof-type signature. 37 73 IPR003851 GO:0003677|GO:0006355
Acco02g1294 277 ProSiteProfiles Zinc finger Dof-type profile. 35 89 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1294 Acco-ChrAcco02 9608542 9610962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1294 30 241 C2C2-Dof Transcription Factor Family AT3G52440 43.396 1.25e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco02g1294 zf-Dof 1.7e-30 No_clan