Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0924 ATGTCGACCAACGATCCTGGTTTTATACTCTTCGGCCAAAAGATGTCGGCATCTCAGATCCCAGCCACCTCTTCCCCGATTCCATCCAACTCTCCTCCCGAGTATGATTGGAGTAATTCAAAGAAATCAGAAGCCGGAATACCTGCTACGGAAAACTCAGAACAACAACAAAATGAGCATCAGAAGAATGAGGCAACGAAGATAAGCAGTGCAGAAGAATTTAAAATGATGAAGAAACCAGACAAGATTCAGCGGTGTCCACGATGCAACAGTATGGACACAAAGTTTTGTTACTTCAACAACTACAACGTGAATCAACCTCGACATTTCTGCAAGAGCTGCCACAGATATTGGACTGCCGGTGGGGCAATGAGAAATGTCCCAGTCGGCGCCGGAAGACGAAGGAACAGGCAACTATCCTCGCCATACCATCGCCAAACTGCAGCATCCTCCGAAGGCATTCCAGTTCCAACCCCAAACACAGACTCATCTTCGCAACAACGTTTCACAACTCTTGAATCCTCATCAACTTTCAAGTCATCAGCACCACCAGATAATACTAGTACTGTGTTAAGATTTGGTCCAGAGGACCCTGTTTCTGAATCTGCGAGTTCATTTCTGATCAATGCTAGTGGCGGTGCTCGTGGAAATGAAGTATCAGAACTTGCAATGCAATGGAACAGAGGTGTGTCCAATCTGATGAACACATCCAATGGTGTGCGGTGTTATCCTGCTGCTCCATGGGTGTTTCCAGTCCAGTGGTATGCTGATAATAAGATTGGCTCACCAAACATTCCTGTACAATTTGTGGCATGTTGGAGTAATGGGACTGGTGTTTCAATTGGCTCTAATGGTCGCCTCTCTTCCTCAACCTCAACCAGTAATGACCCAGCCATTGGAAAATACTGA 909 0.4598 MSTNDPGFILFGQKMSASQIPATSSPIPSNSPPEYDWSNSKKSEAGIPATENSEQQQNEHQKNEATKISSAEEFKMMKKPDKIQRCPRCNSMDTKFCYFNNYNVNQPRHFCKSCHRYWTAGGAMRNVPVGAGRRRNRQLSSPYHRQTAASSEGIPVPTPNTDSSSQQRFTTLESSSTFKSSAPPDNTSTVLRFGPEDPVSESASSFLINASGGARGNEVSELAMQWNRGVSNLMNTSNGVRCYPAAPWVFPVQWYADNKIGSPNIPVQFVACWSNGTGVSIGSNGRLSSSTSTSNDPAIGKY 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0924 302 MobiDBLite consensus disorder prediction 57 72 - -
Acco02g0924 302 MobiDBLite consensus disorder prediction 16 56 - -
Acco02g0924 302 ProSiteProfiles Zinc finger Dof-type profile. 84 138 IPR003851 GO:0003677|GO:0006355
Acco02g0924 302 MobiDBLite consensus disorder prediction 126 195 - -
Acco02g0924 302 PANTHER CYCLIC DOF FACTOR 2 4 300 IPR045174 GO:0003700|GO:0006355
Acco02g0924 302 MobiDBLite consensus disorder prediction 141 188 - -
Acco02g0924 302 Pfam Dof domain, zinc finger 82 138 IPR003851 GO:0003677|GO:0006355
Acco02g0924 302 ProSitePatterns Zinc finger Dof-type signature. 86 122 IPR003851 GO:0003677|GO:0006355
Acco02g0924 302 MobiDBLite consensus disorder prediction 283 302 - -
Acco02g0924 302 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0924 Acco-ChrAcco02 6472642 6474402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0924 1 254 C2C2-Dof Transcription Factor Family AT5G62430 34.375 1.28e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco02g0924 zf-Dof 7.2e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0924 02 6472642 6474402 Acco02g0924 02 6472642 6474402 ECH