Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2205 ATGGACCTTTCTCGGTTATTCCTGGTAATCATATTCGGTGTTGCCGCCGCATCATGGATGGCGGTGGTGGTGGTGGAGGCTCAGCCAGGGGCGACGTTCAAATGCAGCTCGGAAGGTAAAACGTGTCACTCCCTGGTGGATTATTCGTCCCCAAATGAAACCACCTTAGGTCACATTCAAAAGCTTTTCGACCTGAAGCACGTTCTGGACATAGTCGGAGCTAACGCCCTCCCCTCCACCACCAGAGGCAACCACACCGTTAAAAGTGGCGAAATAATTAAAATCCCCTTTCAGTGCCAGTGTTCCAACGGCACCGGCTTATCCAACAAGACGCCTCTCTACACCATCCTGAAAGACGACACGCTTTCCCACATAGCCATGGACGTGTTCTCGCGTTTGGTCACTTACCAACAAATCCAAACTTTCAACAACATATCCGACCCGACAAAAATCCAACCCGGTCAGAAGGTGTGGATCCCCCTCCCTTGCAGCTGCGATCAGGTCGACGGCGCCGACGCGGTCCACTATGGTCATCTGGTGGCTGTTGGGAGCTCCTTTCAGCAGATTGCACAACAATACGGCACCACCCAAGATACCCTTCTTGCCCTCAACAACATTTCTGATCCTAAGTCCCTTCAAGCCGGTCAAATCATCGATGTTCCCCTCAAAGCTTGTTCCTCATCGGCGGTGAGAAATAGCTCCTTGGACTATCCTCTGCTCGTTGCAAAAGGTACCGCCACCTACACTGCCAATGGTTGCGTCAAGTGCAACTGTGACTTTAACAAAACTGTGGGTCAATTACAATGCGAGCCATCGCAAGTTAAACCATATAAATGGCATACATGTCCGTCTATGCTATGTGGAAATTCAACCATTAGCAACATCACTTCTATAGCTTCCTGCGCTCGTACCATCTGTGCTTACACTGGTTATAGCAACAACCAAACTATTTTCACCGATCTTGTCAACGAGTCCACTTGTCCTGCACCAACAGGATCACCAACGGGATCACCAGCAGGATCAGCAGCATCCAGGGCCAACAGCTTGCAAGGCTGGGGTTGGAATAAACTTTTCATGGCACTTCACTTTATCTTCTTTTGTGTCTATCTTATGTAG 1116 0.4955 MDLSRLFLVIIFGVAAASWMAVVVVEAQPGATFKCSSEGKTCHSLVDYSSPNETTLGHIQKLFDLKHVLDIVGANALPSTTRGNHTVKSGEIIKIPFQCQCSNGTGLSNKTPLYTILKDDTLSHIAMDVFSRLVTYQQIQTFNNISDPTKIQPGQKVWIPLPCSCDQVDGADAVHYGHLVAVGSSFQQIAQQYGTTQDTLLALNNISDPKSLQAGQIIDVPLKACSSSAVRNSSLDYPLLVAKGTATYTANGCVKCNCDFNKTVGQLQCEPSQVKPYKWHTCPSMLCGNSTISNITSIASCARTICAYTGYSNNQTIFTDLVNESTCPAPTGSPTGSPAGSAASRANSLQGWGWNKLFMALHFIFFCVYLM 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2205 371 SMART LysM_2 177 221 IPR018392 -
Acco01g2205 371 SMART LysM_2 113 160 IPR018392 -
Acco01g2205 371 SUPERFAMILY LysM domain 113 161 IPR036779 -
Acco01g2205 371 CDD LysM 178 220 IPR018392 -
Acco01g2205 371 ProSiteProfiles LysM domain profile. 176 220 IPR018392 -
Acco01g2205 371 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 21 330 - -
Acco01g2205 371 Gene3D LysM domain 174 234 IPR036779 -
Acco01g2205 371 ProSiteProfiles LysM domain profile. 112 159 IPR018392 -
Acco01g2205 371 Pfam LysM domain 180 221 IPR018392 -
Acco01g2205 371 Pfam LysM domain 114 160 IPR018392 -
Acco01g2205 371 SUPERFAMILY LysM domain 177 221 IPR036779 -
Acco01g2205 371 CDD LysM 114 159 IPR018392 -
Acco01g2205 371 Gene3D LysM domain 108 169 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2205 Acco-ChrAcco01 37939080 37940499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2205 23 332 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 48.077 2.08e-89 271